RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, human

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00475-208	ENST00000444476	KRTAP4-6	Q9BYQ5	205 aa		13.45	□□□□□ -0.26
LINC00475-208	ENST00000444476	VEZT	Q9HBM0	779 aa		13.45	□□□□□ -0.26
LINC00475-208	ENST00000444476	IL1RAPL2	Q9NP60	686 aa		13.45	□□□□□ -0.26
LINC00475-208	ENST00000444476	ZNF70	Q9UC06	446 aa	Predicted RBP	13.45	□□□□□ -0.26
LINC00475-208	ENST00000444476	GAK	O14976	1311 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	CLRN2	A0PK11	232 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	SLC35F4	A4IF30	521 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	GSK3A	P49840	483 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	FMR1	Q06787	632 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	FAM83A	Q86UY5	434 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	HOOK2	Q96ED9	719 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	TDRD3	Q9H7E2	651 aa	Known RBP	13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	LRP2BP	Q9P2M1	347 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	AKAP11	Q9UKA4	1901 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	MYH2	Q9UKX2	1941 aa		13.44	□□□□□ -0.26
LINC00475-208	ENST00000444476	UNCX	A6NJT0	531 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	HUNK	P57058	714 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	PTK2	Q05397	1052 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	HDAC1	Q13547	482 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	TTF1	Q15361	905 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	ARMC9	Q7Z3E5	817 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	MKRN1	Q9UHC7	482 aa	Known RBP	13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	DAGLA	Q9Y4D2	1042 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	GPSM3	Q9Y4H4	160 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	PCDHAC2	Q9Y5I4	1007 aa		13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00475-208	ENST00000444476	APBB1	O00213	710 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	PPP1R12B	O60237	982 aa	Predicted RBP	13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	MECOM	Q03112	1051 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	RASA3	Q14644	834 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	SV2A	Q7L0J3	742 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	CERS3	Q8IU89	383 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	SVOP	Q8N4V2	548 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	GCC1	Q96CN9	775 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	GPATCH3	Q96I76	525 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	TLR7	Q9NYK1	1049 aa	Known RBP	13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	RAI14	Q9P0K7	980 aa		13.42	□□□□□ -0.26
LINC00475-208	ENST00000444476	MROH7-TTC4	A0A0A0MT08	1334 aa		13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	MAST2	Q6P0Q8	1798 aa		13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	SUZ12	Q15022	739 aa	Known RBP	13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	PI16	Q6UXB8	463 aa		13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	PNMA1	Q8ND90	353 aa		13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	NSUN4	Q96CB9	384 aa	Known RBP	13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	CAPNS2	Q96L46	248 aa		13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	NOL10	Q9BSC4	688 aa	Known RBP	13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	SLC24A3	Q9HC58	644 aa		13.41	□□□□□ -0.26
LINC00475-208	ENST00000444476	WDR33	Q9C0J8	1336 aa	Known RBP	13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	GPR75-ASB3	A0A0A6YYF3	556 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	BAG3	O95817	575 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	CYP2E1	P05181	493 aa	Predicted RBP	13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	ATP5J	P18859	108 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	MAP2K2	P36507	400 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	ZAP70	P43403	619 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	MAP3K12	Q12852	859 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	NOG	Q13253	232 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	MAP3K11	Q16584	847 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	NBPF20	Q3BBV1	942 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	RGMB	Q6NW40	437 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	CDC42EP5	Q6NZY7	148 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	IDI2	Q9BXS1	227 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	SNRK	Q9NRH2	765 aa		13.4	□□□□□ -0.26
LINC00475-208	ENST00000444476	TCP10L2	B9ZVM9	353 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	ENTPD3	O75355	529 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	IREB2	P48200	963 aa	Known RBP	13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	MAP2K1	Q02750	393 aa	Predicted RBP	13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	INTS6L	Q5JSJ4	861 aa	Known RBP	13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	NAA16	Q6N069	864 aa	Predicted RBP	13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	DLK2	Q6UY11	383 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	TBC1D9	Q6ZT07	1266 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	FAM151A	Q8WW52	585 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	RWDD1	Q9H446	243 aa	Predicted RBP	13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	POLM	Q9NP87	494 aa	Predicted RBP	13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	USP40	Q9NVE5	1235 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	THSD7B	Q9C0I4	1608 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	AOX1	Q06278	1338 aa		13.39	□□□□□ -0.27
LINC00475-208	ENST00000444476	CDC14C	A4D256	554 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	SLURP2	P0DP57	97 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	BTD	P43251	543 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	ZNF157	P51786	506 aa	Predicted RBP	13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	RELB	Q01201	579 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	PRAMEF18	Q5VWM3	479 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	ZNF385C	Q66K41	422 aa	Predicted RBP	13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	DCAF15	Q66K64	600 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	VWA5B2	Q8N398	1253 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	LRRN4	Q8WUT4	740 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	TEPSIN	Q96N21	525 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	ECHDC1	Q9NTX5	307 aa		13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	SCAF8	Q9UPN6	1271 aa	Known RBP	13.38	□□□□□ -0.27
LINC00475-208	ENST00000444476	DOCK2	Q92608	1830 aa		13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	IDH1	O75874	414 aa	Known RBP	13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	CTSO	P43234	321 aa	Predicted RBP	13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	LDLRAD1	Q5T700	205 aa		13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	CYP4F22	Q6NT55	531 aa		13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	AGBL1	Q96MI9	1066 aa		13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	INSM2	Q96T92	566 aa	Predicted RBP	13.37	□□□□□ -0.27
LINC00475-208	ENST00000444476	HAUS7	Q99871	368 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms