RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 ADGRA2Q96PE1 1338 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 PEX10O60683 326 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 KDM4AO75164 1064 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 USP14P54578 494 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 CAP1Q01518 475 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 COL9A3Q14050 684 aaPredicted RBP20.28■□□□□ 0.84
AP1S3-207ENST00000444408 ZNF296Q8WUU4 475 aaPredicted RBP20.28■□□□□ 0.84
AP1S3-207ENST00000444408 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 ZKSCAN3Q9BRR0 538 aa20.28■□□□□ 0.84
AP1S3-207ENST00000444408 RNF41Q9H4P4 317 aaPredicted RBP20.28■□□□□ 0.84
AP1S3-207ENST00000444408 SLC27A2O14975 620 aa20.27■□□□□ 0.84
AP1S3-207ENST00000444408 RAD21O60216 631 aa20.27■□□□□ 0.84
AP1S3-207ENST00000444408 ECM2O94769 699 aaPredicted RBP20.27■□□□□ 0.84
AP1S3-207ENST00000444408 NECTIN1Q15223 517 aa20.27■□□□□ 0.84
AP1S3-207ENST00000444408 POTEEQ6S8J3 1075 aa20.27■□□□□ 0.84
AP1S3-207ENST00000444408 NUP88Q99567 741 aaPredicted RBP20.27■□□□□ 0.84
AP1S3-207ENST00000444408 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
AP1S3-207ENST00000444408 RPAP3Q9H6T3 665 aaPredicted RBP20.27■□□□□ 0.84
AP1S3-207ENST00000444408 VCPKMTQ9H867 229 aa20.27■□□□□ 0.84
AP1S3-207ENST00000444408 SLC45A1Q9Y2W3 748 aa20.27■□□□□ 0.84
AP1S3-207ENST00000444408 E7EWF7 191 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 TLR2O60603 784 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 TTLL1O95922 423 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 CREB3L3Q68CJ9 461 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 CYB5R4Q7L1T6 521 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 RASGRP2Q7LDG7 609 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 PARK7Q99497 189 aaKnown RBP20.26■□□□□ 0.83
AP1S3-207ENST00000444408 STX8Q9UNK0 236 aa20.26■□□□□ 0.83
AP1S3-207ENST00000444408 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
AP1S3-207ENST00000444408 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
AP1S3-207ENST00000444408 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
AP1S3-207ENST00000444408 CTU1Q7Z7A3 348 aaKnown RBP20.25■□□□□ 0.83
AP1S3-207ENST00000444408 ESR2Q92731 530 aa20.25■□□□□ 0.83
AP1S3-207ENST00000444408 MKL1Q969V6 931 aa20.25■□□□□ 0.83
AP1S3-207ENST00000444408 SH2D4AQ9H788 454 aa20.25■□□□□ 0.83
AP1S3-207ENST00000444408 ZSWIM5Q9P217 1185 aa20.25■□□□□ 0.83
AP1S3-207ENST00000444408 F5H6K3 240 aa20.24■□□□□ 0.83
AP1S3-207ENST00000444408 NDUFB10O96000 172 aa20.24■□□□□ 0.83
AP1S3-207ENST00000444408 IRX3P78415 501 aaPredicted RBP20.24■□□□□ 0.83
AP1S3-207ENST00000444408 KLRC3Q07444 240 aa20.24■□□□□ 0.83
AP1S3-207ENST00000444408 RCSD1Q6JBY9 416 aa20.24■□□□□ 0.83
AP1S3-207ENST00000444408 CATSPERGQ6ZRH7 1159 aa20.24■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L15C9J2P7 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L13C9JLJ4 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L11C9JVI0 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L18D6R9N7 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L22D6RA61 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L17D6RBQ6 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L19D6RCP7 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L20D6RJB6 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 FKTNO75072 461 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 OSBPP22059 807 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 NOVP48745 357 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 SOX10P56693 466 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 USP17L24Q0WX57 530 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 PABPC4Q13310 644 aaKnown RBP eCLIP20.23■□□□□ 0.83
AP1S3-207ENST00000444408 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 SMCR8Q8TEV9 937 aaPredicted RBP20.23■□□□□ 0.83
AP1S3-207ENST00000444408 TANGO6Q9C0B7 1094 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 TCP11L1Q9NUJ3 509 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 FBXO28Q9NVF7 368 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 MTMR7Q9Y216 660 aa20.23■□□□□ 0.83
AP1S3-207ENST00000444408 BCRP11274 1271 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 HERVK_113P62684 666 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
AP1S3-207ENST00000444408 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 CD99L2Q8TCZ2 262 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 LPAR1Q92633 364 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 KRT23Q9C075 422 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 CNNM2Q9H8M5 875 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 TXNRD2Q9NNW7 524 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 PNMA3Q9UL41 463 aa20.22■□□□□ 0.83
AP1S3-207ENST00000444408 CTGFP29279 349 aa20.21■□□□□ 0.83
AP1S3-207ENST00000444408 SP3Q02447 781 aa20.21■□□□□ 0.83
AP1S3-207ENST00000444408 NOM1Q5C9Z4 860 aaKnown RBP20.21■□□□□ 0.83
AP1S3-207ENST00000444408 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
AP1S3-207ENST00000444408 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
AP1S3-207ENST00000444408 MYH4Q9Y623 1939 aa20.2■□□□□ 0.82
AP1S3-207ENST00000444408 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
AP1S3-207ENST00000444408 ANTXR2P58335 489 aa20.2■□□□□ 0.82
AP1S3-207ENST00000444408 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
AP1S3-207ENST00000444408 MB21D2Q8IYB1 491 aaPredicted RBP20.2■□□□□ 0.82
AP1S3-207ENST00000444408 ENAHQ8N8S7 591 aaPredicted RBP20.2■□□□□ 0.82
AP1S3-207ENST00000444408 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
AP1S3-207ENST00000444408 RBPJLQ9UBG7 517 aa20.2■□□□□ 0.82
AP1S3-207ENST00000444408 ZSWIM8A7E2V4 1837 aa20.2■□□□□ 0.82
AP1S3-207ENST00000444408 SPDYE16A6NNV3 312 aaPredicted RBP20.19■□□□□ 0.82
AP1S3-207ENST00000444408 TOP1P11387 765 aaKnown RBP20.19■□□□□ 0.82
AP1S3-207ENST00000444408 MCCP23508 829 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 TRDNQ13061 729 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 PKN2Q16513 984 aaKnown RBP20.19■□□□□ 0.82
AP1S3-207ENST00000444408 ADCK5Q3MIX3 580 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 GMCL1P1Q8NEA9 526 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 PAGR1Q9BTK6 254 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
AP1S3-207ENST00000444408 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms