RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 XDHP47989 1333 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 FAM237AA0A1B0GTK4 181 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 TSPY2A6NKD2 308 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 USP17L8P0C7I0 530 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 SMC1AQ14683 1233 aaKnown RBP21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 STAG2Q8N3U4 1231 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 SLC44A5Q8NCS7 719 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 CAPZA3Q96KX2 299 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 CEP131Q9UPN4 1083 aa21.49■■□□□ 1.03
PAXBP1-204ENST00000443785 PPP1R3GB7ZBB8 358 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 SRGAP2O75044 1071 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 ZRANB2O95218 330 aaKnown RBP eCLIP21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 KRT31Q15323 416 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 SPATA1Q5VX52 437 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 CTR9Q6PD62 1173 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 HPS3Q969F9 1004 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 ZNF512BQ96KM6 892 aaPredicted RBP21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 CCDC87Q9NVE4 849 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 IL6STP40189 918 aaPredicted RBP21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 CHMP4BP1P59074 171 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 APTXQ7Z2E3 356 aaKnown RBP21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 PNKPQ96T60 521 aa21.48■■□□□ 1.03
PAXBP1-204ENST00000443785 A0A1B0GTH6 734 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 TXNRD3Q86VQ6 643 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 VAT1LQ9HCJ6 419 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 ARFGAP3Q9NP61 516 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 STK36Q9NRP7 1315 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 C4AP0C0L4 1744 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 C4BP0C0L5 1744 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 KIF5CO60282 957 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 HNRNPH2P55795 449 aaKnown RBP21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 ERVK-24P63145 666 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 KCTD19Q17RG1 926 aaPredicted RBP21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 PHF20Q9BVI0 1012 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 ADD3Q9UEY8 706 aaKnown RBP21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 ADAMTSL3P82987 1691 aa21.47■■□□□ 1.03
PAXBP1-204ENST00000443785 PMS1P54277 932 aaKnown RBP21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 EIF5P55010 431 aaKnown RBP21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 UBXN1Q04323 297 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 TROAPQ12815 778 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 PTF1AQ7RTS3 328 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 RGS22Q8NE09 1264 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 CTCFLQ8NI51 663 aaPredicted RBP21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 KLK7P49862 253 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 SIK1P57059 783 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 NELFBQ8WX92 580 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 RIOK1Q9BRS2 568 aaKnown RBP21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 MCM9Q9NXL9 1143 aa21.46■■□□□ 1.03
PAXBP1-204ENST00000443785 USP17L3A6NCW0 530 aa21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 USP17L4A6NCW7 530 aa21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 H3BQF6 201 aa21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 NKRFO15226 690 aaKnown RBP eCLIP21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 KRT9P35527 623 aa21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 FILIP1LQ4L180 1135 aa21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 USP17L1Q7RTZ2 530 aa21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 SAP30BPQ9UHR5 308 aaKnown RBP21.45■■□□□ 1.03
PAXBP1-204ENST00000443785 FAM205AQ6ZU69 1335 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 LMAN1P49257 510 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 GOLGA1Q92805 767 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 SLIT2O94813 1529 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 FAM170AA1A519 330 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 MFAP3LO75121 409 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 CAMTA2O94983 1202 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 GNAT2P19087 354 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 NPY5RQ15761 445 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 LONRF2Q1L5Z9 754 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 PDE11AQ9HCR9 933 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 STX8Q9UNK0 236 aa21.45■■□□□ 1.02
PAXBP1-204ENST00000443785 MECOMQ03112 1051 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 FUT2Q10981 343 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 TMTC2Q8N394 836 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 PCMTD1Q96MG8 357 aaPredicted RBP21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 PLEKHA4Q9H4M7 779 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 FAM53CQ9NYF3 392 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 STRCP1A6NGW2 1772 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 PRCPP42785 496 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 PPARDQ03181 441 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 CAVIN4Q5BKX8 364 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 NOA1Q8NC60 698 aaKnown RBP21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 FAM84BQ96KN1 310 aaPredicted RBP21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 DRC1Q96MC2 740 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
PAXBP1-204ENST00000443785 VGLL3A8MV65 326 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 ANKRD65E5RJM6 399 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 KCNJ6P48051 423 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 INF2Q27J81 1249 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 TYW1BQ6NUM6 668 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 HEATR3Q7Z4Q2 680 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 PSMB7Q99436 277 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 SRP68Q9UHB9 627 aaKnown RBP21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 NTSR2O95665 410 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 DIXDC1Q155Q3 683 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 NT5DC1Q5TFE4 455 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 VPS18Q9P253 973 aa21.43■■□□□ 1.02
PAXBP1-204ENST00000443785 GSPT2Q8IYD1 628 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms