RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RASEFQ8IZ41 740 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 SPICE1Q8N0Z3 855 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 LRRC47Q8N1G4 583 aaKnown RBP18.93■□□□□ 0.62
USP39-205ENST00000442708 MKL1Q969V6 931 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 VCPKMTQ9H867 229 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 TCP11L1Q9NUJ3 509 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 ADGRA2Q96PE1 1338 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 KRT23Q9C075 422 aa18.92■□□□□ 0.62
USP39-205ENST00000442708 CNNM2Q9H8M5 875 aa18.92■□□□□ 0.62
USP39-205ENST00000442708 SLC45A1Q9Y2W3 748 aa18.92■□□□□ 0.62
USP39-205ENST00000442708 REC8O95072 547 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 SEC24BO95487 1268 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 HOXA7P31268 230 aaPredicted RBP18.91■□□□□ 0.62
USP39-205ENST00000442708 C8orf34Q49A92 452 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 POTEEQ6S8J3 1075 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 KCNB2Q92953 911 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 USP26Q9BXU7 913 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 ASCC2Q9H1I8 757 aaPredicted RBP18.91■□□□□ 0.62
USP39-205ENST00000442708 RPAP3Q9H6T3 665 aaPredicted RBP18.91■□□□□ 0.62
USP39-205ENST00000442708 STX8Q9UNK0 236 aa18.91■□□□□ 0.62
USP39-205ENST00000442708 CASP8AP2Q9UKL3 1982 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 F5H6K3 240 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 HSPA4P34932 840 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 LBX1P52954 281 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 ANTXR2P58335 489 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 KLRC3Q07444 240 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 MB21D2Q8IYB1 491 aaPredicted RBP18.9■□□□□ 0.62
USP39-205ENST00000442708 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
USP39-205ENST00000442708 SH2D4AQ9H788 454 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 ZFYVE28Q9HCC9 887 aa18.9■□□□□ 0.62
USP39-205ENST00000442708 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 TLR2O60603 784 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 NDUFB10O96000 172 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 CTCFP49711 727 aaPredicted RBP18.89■□□□□ 0.61
USP39-205ENST00000442708 ADCK5Q3MIX3 580 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 CATSPERGQ6ZRH7 1159 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 CHST3Q7LGC8 479 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 NCOA7Q8NI08 942 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 CHMP4CQ96CF2 233 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 P2RX7Q99572 595 aaKnown RBP18.89■□□□□ 0.61
USP39-205ENST00000442708 TMEM47Q9BQJ4 181 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 GOPCQ9HD26 462 aa18.89■□□□□ 0.61
USP39-205ENST00000442708 USP17L15C9J2P7 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L13C9JLJ4 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L11C9JVI0 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L18D6R9N7 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L22D6RA61 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L17D6RBQ6 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L19D6RCP7 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L20D6RJB6 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 GPR25O00155 361 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 RAD21O60216 631 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 PEX10O60683 326 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 USP17L24Q0WX57 530 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 TRDNQ13061 729 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 SEC23AQ15436 765 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 C17orf99Q6UX52 265 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 ENAHQ8N8S7 591 aaPredicted RBP18.88■□□□□ 0.61
USP39-205ENST00000442708 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 LPAR1Q92633 364 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 ZSCAN10Q96SZ4 725 aaPredicted RBP18.88■□□□□ 0.61
USP39-205ENST00000442708 PARK7Q99497 189 aaKnown RBP18.88■□□□□ 0.61
USP39-205ENST00000442708 CPA4Q9UI42 421 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 SYNPO2Q9UMS6 1093 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 SNX14Q9Y5W7 946 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 TNKSO95271 1327 aa18.88■□□□□ 0.61
USP39-205ENST00000442708 WDR46O15213 610 aaKnown RBP18.87■□□□□ 0.61
USP39-205ENST00000442708 SLC34A2O95436 690 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 OSBPP22059 807 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 NT5C2P49902 561 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 CAP1Q01518 475 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 PABPC4Q13310 644 aaKnown RBP eCLIP18.87■□□□□ 0.61
USP39-205ENST00000442708 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 RALYLQ86SE5 291 aaKnown RBP18.87■□□□□ 0.61
USP39-205ENST00000442708 TTC14Q96N46 770 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 SENP2Q9HC62 589 aa18.87■□□□□ 0.61
USP39-205ENST00000442708 TOP1P11387 765 aaKnown RBP18.86■□□□□ 0.61
USP39-205ENST00000442708 HERVK_113P62684 666 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 IRX3P78415 501 aaPredicted RBP18.86■□□□□ 0.61
USP39-205ENST00000442708 PPP4R3BQ5MIZ7 849 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 SLFN13Q68D06 897 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 IQCA1Q86XH1 822 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 DGKHQ86XP1 1220 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 ZNF296Q8WUU4 475 aaPredicted RBP18.86■□□□□ 0.61
USP39-205ENST00000442708 ANKS1AQ92625 1134 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 TANGO6Q9C0B7 1094 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
USP39-205ENST00000442708 FBXO28Q9NVF7 368 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 PNMA3Q9UL41 463 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 COL11A1P12107 1806 aaPredicted RBP18.86■□□□□ 0.61
USP39-205ENST00000442708 A0A0G2JMZ2 1700 aa18.86■□□□□ 0.61
USP39-205ENST00000442708 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
USP39-205ENST00000442708 BCRP11274 1271 aa18.85■□□□□ 0.61
USP39-205ENST00000442708 MCCP23508 829 aa18.85■□□□□ 0.61
USP39-205ENST00000442708 NOM1Q5C9Z4 860 aaKnown RBP18.85■□□□□ 0.61
USP39-205ENST00000442708 IGDCC4Q8TDY8 1250 aa18.85■□□□□ 0.61
USP39-205ENST00000442708 UBAC1Q9BSL1 405 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms