RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 RPTORQ8N122 1335 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 MYH1P12882 1939 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 ZKSCAN1P17029 563 aaPredicted RBP11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 PLCD1P51178 756 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP14P54578 494 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 WDR78Q5VTH9 848 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 PLEKHH3Q7Z736 793 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 ACER1Q8TDN7 264 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 DIS3LQ8TF46 1054 aaKnown RBP11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 SOCS4Q8WXH5 440 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 TRIB2Q92519 343 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 RIOK1Q9BRS2 568 aaKnown RBP11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 EHD4Q9H223 541 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 MCM9Q9NXL9 1143 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
AC011228.1-201ENST00000439027 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
AC011228.1-201ENST00000439027 SHMT1P34896 483 aa11.09□□□□□ -0.63
AC011228.1-201ENST00000439027 RGS2P41220 211 aa11.09□□□□□ -0.63
AC011228.1-201ENST00000439027 GPR142Q7Z601 462 aa11.09□□□□□ -0.63
AC011228.1-201ENST00000439027 TRMT44Q8IYL2 757 aaKnown RBP11.09□□□□□ -0.63
AC011228.1-201ENST00000439027 PORCNQ9H237 461 aa11.09□□□□□ -0.63
AC011228.1-201ENST00000439027 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 FOCADQ5VW36 1801 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 RAB11FIP3O75154 756 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 GLRX3O76003 335 aaKnown RBP11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 CCNA1P78396 465 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 SEPT2Q15019 361 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 CATSPERGQ6ZRH7 1159 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 C12orf42Q96LP6 360 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 NBPF3Q9H094 633 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 KIAA1683Q9H0B3 1180 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 RABGAP1Q9Y3P9 1069 aa11.08□□□□□ -0.64
AC011228.1-201ENST00000439027 CYP2D6P10635 497 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 VCAM1P19320 739 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 CACNB2Q08289 660 aaPredicted RBP11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 CCL14Q16627 93 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 MORN1Q5T089 497 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 SMC5Q8IY18 1101 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 LCORLQ8N3X6 602 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 SDR42E1Q8WUS8 393 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 C11orf49Q9H6J7 331 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 RPAP3Q9H6T3 665 aaPredicted RBP11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 STAP2Q9UGK3 403 aa11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 ZMYND8Q9ULU4 1186 aaPredicted RBP11.07□□□□□ -0.64
AC011228.1-201ENST00000439027 TCRBV5S4A2TA0A5A2 114 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 PRKAB2O43741 272 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 CNMDO75829 334 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 MBD4O95243 580 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 GUCY1A2P33402 732 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 MAP3K21Q5TCX8 1036 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 MFSD14CQ5VZR4 134 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 FBXO22Q8NEZ5 403 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 USP6NLQ92738 828 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 DYNLL2Q96FJ2 89 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 APBA2Q99767 749 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 TANGO6Q9C0B7 1094 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 PAG1Q9NWQ8 432 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 OGDHLQ9ULD0 1010 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
AC011228.1-201ENST00000439027 SLC15A5A6NIM6 579 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 ATP5JP18859 108 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 ATP2B2Q01814 1243 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 GABPAQ06546 454 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 ANKRD45Q5TZF3 282 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 AMOTL1Q8IY63 956 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 BTBD7Q9P203 1132 aa11.05□□□□□ -0.64
AC011228.1-201ENST00000439027 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
AC011228.1-201ENST00000439027 POTEMA6NI47 508 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms