RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 RAD21O60216 631 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 NOVP48745 357 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 WTAPQ15007 396 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 OTUD7BQ6GQQ9 843 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 ENAHQ8N8S7 591 aaPredicted RBP17.28■□□□□ 0.36
SKA2-202ENST00000437036 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
SKA2-202ENST00000437036 NKX2-3Q8TAU0 364 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 ANKS1AQ92625 1134 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 LPAR1Q92633 364 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 MS4A4AQ96JQ5 239 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 VCPKMTQ9H867 229 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
SKA2-202ENST00000437036 TESPA1A2RU30 521 aaPredicted RBP17.27■□□□□ 0.36
SKA2-202ENST00000437036 AOC2O75106 756 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 RBM25P49756 843 aaKnown RBP17.27■□□□□ 0.36
SKA2-202ENST00000437036 ANTXR2P58335 489 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.36
SKA2-202ENST00000437036 RUFY3Q7L099 469 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 LRRC47Q8N1G4 583 aaKnown RBP17.27■□□□□ 0.36
SKA2-202ENST00000437036 C12orf42Q96LP6 360 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
SKA2-202ENST00000437036 GREB1LQ9C091 1923 aaPredicted RBP17.26■□□□□ 0.35
SKA2-202ENST00000437036 F5H6K3 240 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 EXOSC10Q01780 885 aaKnown RBP17.26■□□□□ 0.35
SKA2-202ENST00000437036 KLRC3Q07444 240 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 SEC23AQ15436 765 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 RCSD1Q6JBY9 416 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 IGDCC4Q8TDY8 1250 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 BRI3BPQ8WY22 251 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
SKA2-202ENST00000437036 CCDC69A6NI79 296 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
SKA2-202ENST00000437036 LIFRP42702 1097 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 TM4SF4P48230 202 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 SLFN13Q68D06 897 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 SYNE3Q6ZMZ3 975 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 ANKRD23Q86SG2 305 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 PNMA1Q8ND90 353 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
SKA2-202ENST00000437036 AGTPBP1Q9UPW5 1226 aa17.25■□□□□ 0.35
SKA2-202ENST00000437036 WDR46O15213 610 aaKnown RBP17.24■□□□□ 0.35
SKA2-202ENST00000437036 NDUFB10O96000 172 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 CPA1P15085 419 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 SPICE1Q8N0Z3 855 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
SKA2-202ENST00000437036 LY9Q9HBG7 655 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 PNMA3Q9UL41 463 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
SKA2-202ENST00000437036 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
SKA2-202ENST00000437036 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 VCAM1P19320 739 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 OSBPP22059 807 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 SLC1A4P43007 532 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 MOGSQ13724 837 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 Q6ZUG5 572 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 IFNL1Q8IU54 200 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 GMCL1Q96IK5 515 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 ZIC5Q96T25 663 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 SLC45A1Q9Y2W3 748 aa17.23■□□□□ 0.35
SKA2-202ENST00000437036 PDHXO00330 501 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 BMP3P12645 472 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 IRX3P78415 501 aaPredicted RBP17.22■□□□□ 0.35
SKA2-202ENST00000437036 MAP2K1Q02750 393 aaPredicted RBP17.22■□□□□ 0.35
SKA2-202ENST00000437036 GPAT2Q6NUI2 795 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 FBXL16Q8N461 479 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 DNAJC5GQ8N7S2 189 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 RPAP3Q9H6T3 665 aaPredicted RBP17.22■□□□□ 0.35
SKA2-202ENST00000437036 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
SKA2-202ENST00000437036 CALM1P0DP23 149 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 CALM2P0DP24 149 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 CALM3P0DP25 149 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 HOXA7P31268 230 aaPredicted RBP17.21■□□□□ 0.35
SKA2-202ENST00000437036 NEK4P51957 841 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 DGKZQ13574 1117 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
SKA2-202ENST00000437036 RABEP1Q15276 862 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms