RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 BRPF3Q9ULD4 1205 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 USP17L10C9JJH3 530 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 TOP1P11387 765 aaKnown RBP19.69■□□□□ 0.74
CALD1-209ENST00000436461 HMGCS2P54868 508 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 PPIL2Q13356 520 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 CYP4F22Q6NT55 531 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 KAT14Q9H8E8 782 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 TMX2Q9Y320 296 aa19.69■□□□□ 0.74
CALD1-209ENST00000436461 BACE1P56817 501 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 C1QTNF8P60827 252 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 CCDC178Q5BJE1 867 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 SPRYD7Q5W111 196 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 PNMA1Q8ND90 353 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 ANKS1AQ92625 1134 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 MKL1Q969V6 931 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 AGXT2Q9BYV1 514 aa19.68■□□□□ 0.74
CALD1-209ENST00000436461 NAP1L2Q9ULW6 460 aaPredicted RBP19.68■□□□□ 0.74
CALD1-209ENST00000436461 PCNTO95613 3336 aa19.67■□□□□ 0.74
CALD1-209ENST00000436461 CCDC69A6NI79 296 aa19.67■□□□□ 0.74
CALD1-209ENST00000436461 LIFRP42702 1097 aa19.67■□□□□ 0.74
CALD1-209ENST00000436461 MTA3Q9BTC8 594 aa19.67■□□□□ 0.74
CALD1-209ENST00000436461 EMILIN3Q9NT22 766 aa19.67■□□□□ 0.74
CALD1-209ENST00000436461 KLF18A0A0U1RQI7 1052 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 FAM155AB1AL88 458 aaPredicted RBP19.66■□□□□ 0.74
CALD1-209ENST00000436461 F5H6K3 240 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 SLC10A3P09131 477 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 KLRC3Q07444 240 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 CCDC144CPQ8IYA2 1237 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 ZNF654Q8IZM8 581 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 NUP133Q8WUM0 1156 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 NUP88Q99567 741 aaPredicted RBP19.66■□□□□ 0.74
CALD1-209ENST00000436461 KIAA1683Q9H0B3 1180 aa19.66■□□□□ 0.74
CALD1-209ENST00000436461 NDUFB10O96000 172 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 DEFB115Q30KQ5 88 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 SGMS1Q86VZ5 419 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 MICU3Q86XE3 530 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 ZIC5Q96T25 663 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 VCPKMTQ9H867 229 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 KCNH4Q9UQ05 1017 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 LOC285556D6RIA3 1793 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 RASSF10A6NK89 507 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 LARGE1O95461 756 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 PPP4R3BQ5MIZ7 849 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 SLFN13Q68D06 897 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 APOA5Q6Q788 366 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 FBXL16Q8N461 479 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 TBC1D2Q9BYX2 928 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 SH2D4AQ9H788 454 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 TPCN1Q9ULQ1 816 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 SLC12A7Q9Y666 1083 aa19.65■□□□□ 0.74
CALD1-209ENST00000436461 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
CALD1-209ENST00000436461 A0A0G2JLL6 359 aaPredicted RBP19.64■□□□□ 0.73
CALD1-209ENST00000436461 ZBTB48P10074 688 aaPredicted RBP19.64■□□□□ 0.73
CALD1-209ENST00000436461 TROAPQ12815 778 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 STK3Q13188 491 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 USP17L2Q6R6M4 530 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 GADL1Q6ZQY3 521 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 PRRT2Q7Z6L0 340 aaPredicted RBP19.64■□□□□ 0.73
CALD1-209ENST00000436461 CATIPQ7Z7H3 387 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 HHIPL1Q96JK4 782 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 MS4A4AQ96JQ5 239 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 GOPCQ9HD26 462 aa19.64■□□□□ 0.73
CALD1-209ENST00000436461 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
CALD1-209ENST00000436461 GOLGA8BA8MQT2 603 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 CXCL11O14625 94 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 ST18O60284 1047 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 GOLGA8HP0CJ92 632 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 PDHBP11177 359 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 SNAPC2Q13487 334 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 MOGSQ13724 837 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 TREML2Q5T2D2 321 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 KCTD1Q719H9 257 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 TMTC2Q8N394 836 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 GMCL1P1Q8NEA9 526 aa19.63■□□□□ 0.73
CALD1-209ENST00000436461 ALDH8A1Q9H2A2 487 aaPredicted RBP19.63■□□□□ 0.73
CALD1-209ENST00000436461 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 AOC2O75106 756 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 VCAM1P19320 739 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 USP14P54578 494 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 SH3D19Q5HYK7 790 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CAPNS2Q96L46 248 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 TMOD4Q9NZQ9 345 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CCL15-CCL14A0A0B4J2E2 113 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 ZBTB43O43298 467 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 DTNBO60941 627 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 HSPA6P17066 643 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CCT2P78371 535 aaKnown RBP19.62■□□□□ 0.73
CALD1-209ENST00000436461 CCL15Q16663 113 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CCDC96Q2M329 555 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 STAG2Q8N3U4 1231 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CCDC102AQ96A19 550 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 GPCPD1Q9NPB8 672 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 TSHZ2Q9NRE2 1034 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 HPS5Q9UPZ3 1129 aa19.62■□□□□ 0.73
CALD1-209ENST00000436461 CEP350Q5VT06 3117 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
CALD1-209ENST00000436461 SLC1A4P43007 532 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms