RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 NAV1Q8NEY1 1877 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 HSP90AA1P07900 732 aaKnown RBP11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 YY1P25490 414 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 CDC27P30260 824 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 ECE1P42892 770 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 FKBP1BP68106 108 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 RTN1Q16799 776 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 CCDC84Q86UT8 332 aaPredicted RBP11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 ANKRD13AQ8IZ07 590 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 LLPHQ9BRT6 129 aaKnown RBP11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 CSADQ9Y600 493 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 ZHX2Q9Y6X8 837 aa11.53□□□□□ -0.56
AC004448.3-201ENST00000435953 MYH1P12882 1939 aa11.52□□□□□ -0.56
AC004448.3-201ENST00000435953 FOCADQ5VW36 1801 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 ECM29Q5VYK3 1845 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 SNHG28P0DPA3 235 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 KIF5BP33176 963 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 GNAQP50148 359 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 SPP2Q13103 211 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 VGLL4Q14135 290 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 GRM4Q14833 912 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 NTRK3Q16288 839 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 CST9Q5W186 159 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 CPLX2Q6PUV4 134 aaKnown RBP11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 ZNF280CQ8ND82 737 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 CTCFLQ8NI51 663 aaPredicted RBP11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 SH2D4AQ9H788 454 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 AS3MTQ9HBK9 375 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 RBM28Q9NW13 759 aaKnown RBP11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 MAD2L2Q9UI95 211 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 MTMR7Q9Y216 660 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 SNCAIPQ9Y6H5 919 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 CDK5RAP2Q96SN8 1893 aa11.52□□□□□ -0.57
AC004448.3-201ENST00000435953 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 CPLX1O14810 134 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 TOMM70O94826 608 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 PDHBP11177 359 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 ERO1BQ86YB8 467 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 STAG2Q8N3U4 1231 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 SMARCC2Q8TAQ2 1214 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 DCAF4Q8WV16 495 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 GMCL1Q96IK5 515 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 LZTS2Q9BRK4 669 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 KIAA1683Q9H0B3 1180 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 VCPKMTQ9H867 229 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 CWC22Q9HCG8 908 aaKnown RBP11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 AFG3L2Q9Y4W6 797 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 LAMA4Q16363 1823 aa11.51□□□□□ -0.57
AC004448.3-201ENST00000435953 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 RAD21O60216 631 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 DTNBO60941 627 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 CDKL5O76039 1030 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 NDUFB10O96000 172 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 GOLGA8HP0CJ92 632 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 IFNAR1P17181 557 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 USP14P54578 494 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 BACE1P56817 501 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 PPATQ06203 517 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 ZNF543Q08ER8 600 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 FUT2Q10981 343 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 KIAA1755Q5JYT7 1200 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 SRBD1Q8N5C6 995 aaKnown RBP11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 ZNF784Q8NCA9 323 aaPredicted RBP11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 NSUN7Q8NE18 718 aaKnown RBP11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 NID2Q14112 1375 aa11.5□□□□□ -0.57
AC004448.3-201ENST00000435953 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
AC004448.3-201ENST00000435953 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
AC004448.3-201ENST00000435953 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
AC004448.3-201ENST00000435953 CXCL11O14625 94 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms