RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ST18O60284 1047 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
CPNE1-214ENST00000435747 RARBP10826 455 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 PRAMEF19Q5SWL8 479 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
CPNE1-214ENST00000435747 LPIN2Q92539 896 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
CPNE1-214ENST00000435747 CD320Q9NPF0 282 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 HERC5Q9UII4 1024 aaKnown RBP12.85□□□□□ -0.35
CPNE1-214ENST00000435747 TBX21Q9UL17 535 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 ZFHX2Q9C0A1 2572 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-214ENST00000435747 ZNF236Q9UL36 1845 aa12.85□□□□□ -0.35
CPNE1-214ENST00000435747 EYA2O00167 538 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 ALADP13716 330 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-214ENST00000435747 ADORA2AP29274 412 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-214ENST00000435747 MEIS3Q99687 375 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 STARD7Q9NQZ5 370 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
CPNE1-214ENST00000435747 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 PGK1P00558 417 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 RABGGTBP53611 331 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 RHBDL3P58872 404 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 SLC5A4Q9NY91 659 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 CACNA1HO95180 2353 aa12.83□□□□□ -0.36
CPNE1-214ENST00000435747 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 RFXAPO00287 272 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 SEMA3EO15041 775 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 BCAR3O75815 825 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 CIAO1O76071 339 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-214ENST00000435747 TRIM27P14373 513 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 MTX1Q13505 466 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
CPNE1-214ENST00000435747 GJD3Q8N144 294 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 NUP133Q8WUM0 1156 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 IL23AQ9NPF7 189 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 ABCF2Q9UG63 623 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
CPNE1-214ENST00000435747 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
CPNE1-214ENST00000435747 ZNFX1Q9P2E3 1918 aaKnown RBP12.82□□□□□ -0.36
CPNE1-214ENST00000435747 GPR75-ASB3A0A0A6YYF3 556 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 STRNO43815 780 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 GDF11O95390 407 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 FGBP02675 491 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 MYOGP15173 224 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 SSTR3P32745 418 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-214ENST00000435747 COPRSQ9NQ92 184 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 GINM1Q9NU53 330 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 PI4KBQ9UBF8 816 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
CPNE1-214ENST00000435747 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 C5orf42Q9H799 3197 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 COBLO75128 1261 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 ACLYP53396 1101 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 JAG1P78504 1218 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 ZYXQ15942 572 aaKnown RBP12.8□□□□□ -0.36
CPNE1-214ENST00000435747 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-214ENST00000435747 KRT40Q6A162 431 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 LBX2Q6XYB7 198 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 OTOP2Q7RTS6 562 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 FEZ1Q99689 392 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 TSEN34Q9BSV6 310 aaKnown RBP12.8□□□□□ -0.36
CPNE1-214ENST00000435747 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 TRIOO75962 3097 aa12.8□□□□□ -0.36
CPNE1-214ENST00000435747 MOXD2PA6NHM9 499 aa12.79□□□□□ -0.36
CPNE1-214ENST00000435747 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-214ENST00000435747 PHKA1P46020 1223 aa12.79□□□□□ -0.36
CPNE1-214ENST00000435747 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-214ENST00000435747 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
CPNE1-214ENST00000435747 C12orf42Q96LP6 360 aa12.79□□□□□ -0.36
CPNE1-214ENST00000435747 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
CPNE1-214ENST00000435747 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
CPNE1-214ENST00000435747 SLC4A7Q9Y6M7 1214 aa12.79□□□□□ -0.36
CPNE1-214ENST00000435747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-214ENST00000435747 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-214ENST00000435747 CYP2C18P33260 490 aa12.78□□□□□ -0.36
CPNE1-214ENST00000435747 ATP2B3Q16720 1220 aa12.78□□□□□ -0.36
CPNE1-214ENST00000435747 FAM178BQ8IXR5 827 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms