RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
LDLRAD4-204ENST00000435606 CCDC121Q6ZUS5 278 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 DIS3L2Q8IYB7 885 aaKnown RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 TEKT3Q9BXF9 490 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 GOLGA8CPA6NN73 597 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 N4BP1O75113 896 aaKnown RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 SARNPP82979 210 aaKnown RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 FBXO11Q86XK2 927 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 HAUS1Q96CS2 278 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 CTTNBP2NLQ9P2B4 639 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 XDHP47989 1333 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 ICA1Q05084 483 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 ADD3Q9UEY8 706 aaKnown RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 POLR2BP30876 1174 aaKnown RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 POLGP54098 1239 aaPredicted RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 KRT81Q14533 505 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 ZAP70P43403 619 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 KARSQ15046 597 aaKnown RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 ABCB5Q2M3G0 1257 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 CROCCP2Q86T23 111 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 BLMP54132 1417 aaPredicted RBP11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 TUBB2AQ13885 445 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 ATP2A3Q93084 1043 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 MMS19Q96T76 1030 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 TUBB2BQ9BVA1 445 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
LDLRAD4-204ENST00000435606 GALNT17Q6IS24 598 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 TBC1D7Q9P0N9 293 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 HMGB1P1B2RPK0 211 aaPredicted RBP11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 MLKLQ8NB16 471 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 EPSTI1Q96J88 318 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 LEMD3Q9Y2U8 911 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 ADGBQ8N7X0 1667 aa11.77□□□□□ -0.52
LDLRAD4-204ENST00000435606 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 VPS16Q9H269 839 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 NEO1Q92859 1461 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 PCP11498 1178 aaKnown RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 SKAP1Q86WV1 359 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 DSCC1Q9BVC3 393 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 FEZ2Q9UHY8 353 aaPredicted RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 TRIM37O94972 964 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 PTPREP23469 700 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 SCNN1DP51172 638 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 XKR9Q5GH70 373 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 ARHGEF37A1IGU5 675 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 TLR3O15455 904 aaKnown RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 SATB1Q01826 763 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 HESX1Q9UBX0 185 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
LDLRAD4-204ENST00000435606 CCDC160A6NGH7 325 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 INTS8Q75QN2 995 aaKnown RBP11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 IREB2P48200 963 aaKnown RBP11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 SEMA3EO15041 775 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 STAM2O75886 525 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 BTDP43251 543 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 ST7Q9NRC1 585 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 PHKG2P15735 406 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 SIK1P57059 783 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 G2E3Q7L622 706 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 METTL23Q86XA0 190 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 PRR16Q569H4 304 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 ABCA5Q8WWZ7 1642 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 ZNF804BA4D1E1 1349 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 USP19O94966 1318 aa11.76□□□□□ -0.53
LDLRAD4-204ENST00000435606 PPP2R5CQ13362 524 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 SFMBT2Q5VUG0 894 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 RAB3IPQ96QF0 476 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 ASIC3Q9UHC3 531 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 IPO11Q9UI26 975 aaKnown RBP11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
LDLRAD4-204ENST00000435606 ABCD1P33897 745 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms