RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 TRIM10Q9UDY6 481 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 TNKSO95271 1327 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 PHACTR2O75167 634 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 PLEKHA8P1O95397 391 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 CTAGE8P0CG41 777 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 FECHP22830 423 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 KRT2P35908 639 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
TMCO3-202ENST00000434316 SLC20A2Q08357 652 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 CTAGE4Q8IX94 777 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 PIGBQ92521 554 aa16.91■□□□□ 0.3
TMCO3-202ENST00000434316 PDE8AO60658 829 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 ERLIN1O75477 346 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 ACTN2P35609 894 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 CASP8Q14790 479 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-202ENST00000434316 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-202ENST00000434316 MYH3P11055 1940 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 SEMA3EO15041 775 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 SLC5A1P13866 664 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 BCAMP50895 628 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 PPARAQ07869 468 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 SEC23AQ15436 765 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 CT47A1Q5JQC4 288 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-202ENST00000434316 C10orf67Q8IYJ2 551 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 CHP1Q99653 195 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-202ENST00000434316 V9GY48 417 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-202ENST00000434316 ITIH6Q6UXX5 1313 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 MYO1CO00159 1063 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 STARD3NLO95772 234 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 FOXR1Q6PIV2 292 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 CCDC51Q96ER9 411 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 MAPK8IP1Q9UQF2 711 aa16.9■□□□□ 0.3
TMCO3-202ENST00000434316 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
TMCO3-202ENST00000434316 MTRQ99707 1265 aa16.89■□□□□ 0.29
TMCO3-202ENST00000434316 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
TMCO3-202ENST00000434316 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
TMCO3-202ENST00000434316 FUT2Q10981 343 aa16.89■□□□□ 0.29
TMCO3-202ENST00000434316 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
TMCO3-202ENST00000434316 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
TMCO3-202ENST00000434316 LIMA1Q9UHB6 759 aaKnown RBP16.89■□□□□ 0.29
TMCO3-202ENST00000434316 TFR2Q9UP52 801 aa16.89■□□□□ 0.29
TMCO3-202ENST00000434316 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
TMCO3-202ENST00000434316 KRT9P35527 623 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 AMPD2Q01433 879 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 PTGDRQ13258 359 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 TUBB2AQ13885 445 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 WHAMMP3Q1A5X7 153 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 TUBB2BQ9BVA1 445 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 REXO2Q9Y3B8 237 aaKnown RBP16.88■□□□□ 0.29
TMCO3-202ENST00000434316 SHANK3Q9BYB0 1731 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
TMCO3-202ENST00000434316 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 EIF3JO75822 258 aaKnown RBP16.88■□□□□ 0.29
TMCO3-202ENST00000434316 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 FERMT2Q96AC1 680 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
TMCO3-202ENST00000434316 MYO6Q9UM54 1294 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 CYP2D7A0A087X1C5 515 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 NPY5RQ15761 445 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 TTC38Q5R3I4 469 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 ENAHQ8N8S7 591 aaPredicted RBP16.88■□□□□ 0.29
TMCO3-202ENST00000434316 TSPYL1Q9H0U9 437 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 HDAC6Q9UBN7 1215 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 GUCA1BQ9UMX6 200 aa16.88■□□□□ 0.29
TMCO3-202ENST00000434316 DOCK2Q92608 1830 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 ENC1O14682 589 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 XBP1P17861 261 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 GNAT2P19087 354 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 E2F4Q16254 413 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
TMCO3-202ENST00000434316 LRP2BPQ9P2M1 347 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
TMCO3-202ENST00000434316 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 ADAMTS3O15072 1205 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 KCNJ12Q14500 433 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 LEKR1Q6ZMV7 388 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 SRLQ86TD4 932 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 NELFBQ8WX92 580 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
TMCO3-202ENST00000434316 RRP15Q9Y3B9 282 aaKnown RBP16.87■□□□□ 0.29
TMCO3-202ENST00000434316 TCP11X2Q5H9J9 407 aa16.86■□□□□ 0.29
TMCO3-202ENST00000434316 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
TMCO3-202ENST00000434316 LRRC10BA6NIK2 292 aa16.86■□□□□ 0.29
TMCO3-202ENST00000434316 CYP7A1P22680 504 aa16.86■□□□□ 0.29
TMCO3-202ENST00000434316 RCAN1P53805 252 aa16.86■□□□□ 0.29
TMCO3-202ENST00000434316 PAK1Q13153 545 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms