RNA–Protein interactions for RNA: ENST00000432343.1

ARPC1B-208, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 839 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-208ENST00000432343 TNKSO95271 1327 aa16.16■□□□□ 0.18
ARPC1B-208ENST00000432343 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 IFIT3O14879 490 aaKnown RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 PRC1O43663 620 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 CPA1P15085 419 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 VCAM1P19320 739 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 TAF1CQ15572 869 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 RASGRP2Q7LDG7 609 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 ANKRD23Q86SG2 305 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 MB21D2Q8IYB1 491 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 PROCA1Q8NCQ7 364 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 TCEANC2Q96MN5 208 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 NUP88Q99567 741 aaPredicted RBP16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 LRRC2Q9BYS8 371 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 RNF186Q9NXI6 227 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 AGTPBP1Q9UPW5 1226 aa16.15■□□□□ 0.18
ARPC1B-208ENST00000432343 HSPA1AP0DMV8 641 aaKnown RBP16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 HSPA1BP0DMV9 641 aaKnown RBP16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 CYP2C8P10632 490 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 ANTXR2P58335 489 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 KRT32Q14532 448 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 TMEM47Q9BQJ4 181 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 TCP11L1Q9NUJ3 509 aa16.14■□□□□ 0.17
ARPC1B-208ENST00000432343 ERICH2A1L162 156 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 F5H6K3 240 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 ECM2O94769 699 aaPredicted RBP16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 NDUFB10O96000 172 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 KLRC3Q07444 240 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 PPP4R3BQ5MIZ7 849 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 IFIT1BQ5T764 474 aaKnown RBP16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 SLFN13Q68D06 897 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 RCSD1Q6JBY9 416 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 ENAHQ8N8S7 591 aaPredicted RBP16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
ARPC1B-208ENST00000432343 RLFQ13129 1914 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 OSBPP22059 807 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 MCM5P33992 734 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 CRHR2Q13324 411 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 WTAPQ15007 396 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 SART3Q15020 963 aaKnown RBP16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 KCNB2Q92953 911 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 MKL1Q969V6 931 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 C12orf42Q96LP6 360 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 ASCC2Q9H1I8 757 aaPredicted RBP16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 R3HDMLQ9H3Y0 253 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
ARPC1B-208ENST00000432343 CASP8AP2Q9UKL3 1982 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L15C9J2P7 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L13C9JLJ4 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L11C9JVI0 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L18D6R9N7 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L22D6RA61 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L17D6RBQ6 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L19D6RCP7 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L20D6RJB6 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 FOXN1O15353 648 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 USP17L24Q0WX57 530 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.173e-9■□□□□ 9.7
ARPC1B-208ENST00000432343 TSGA10IPQ3SY00 556 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 CCDC178Q5BJE1 867 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 LPAR1Q92633 364 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 ZFYVE28Q9HCC9 887 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 MYH6P13533 1939 aa16.11■□□□□ 0.17
ARPC1B-208ENST00000432343 MGAMO43451 1857 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 WDR46O15213 610 aaKnown RBP16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 NT5C2P49902 561 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 IKQ13123 557 aaPredicted RBP16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 SEC23AQ15436 765 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 RAB11FIP4Q86YS3 637 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 PNMA1Q8ND90 353 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 GMCL1P1Q8NEA9 526 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 TTC14Q96N46 770 aa16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 PARK7Q99497 189 aaKnown RBP16.1■□□□□ 0.17
ARPC1B-208ENST00000432343 FBXO28Q9NVF7 368 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms