RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ZNF213O14771 459 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 ORC4O43929 436 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 HERVK_113P62684 666 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 TFAP4Q01664 338 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 P2RX7Q99572 595 aaKnown RBP20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 RNF41Q9H4P4 317 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 TSPY2A6NKD2 308 aa20.59■□□□□ 0.89
CTDSP1-203ENST00000431127 HOXD10P28358 340 aa20.59■□□□□ 0.89
CTDSP1-203ENST00000431127 PSMC4P43686 418 aa20.59■□□□□ 0.89
CTDSP1-203ENST00000431127 FCGRTP55899 365 aa20.59■□□□□ 0.89
CTDSP1-203ENST00000431127 FAM47AQ5JRC9 791 aa20.59■□□□□ 0.89
CTDSP1-203ENST00000431127 MTMR4Q9NYA4 1195 aa20.59■□□□□ 0.89
CTDSP1-203ENST00000431127 FMNL1O95466 1100 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 TTLL1O95922 423 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 NT5C2P49902 561 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 PRMT2P55345 433 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 HAND2P61296 217 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 IMMTQ16891 758 aaKnown RBP20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 AKNAD1Q5T1N1 836 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 MFSD6Q6ZSS7 791 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 STAG1Q8WVM7 1258 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 MKL1Q969V6 931 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 CEP95Q96GE4 821 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 ARHGAP39Q9C0H5 1083 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 TOMM22Q9NS69 142 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 HOXC10Q9NYD6 342 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 CLIP2Q9UDT6 1046 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 PTPN22Q9Y2R2 807 aa20.58■□□□□ 0.89
CTDSP1-203ENST00000431127 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 SGSM2O43147 1006 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 RANBP6O60518 1105 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 COG2Q14746 738 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 SPICE1Q8N0Z3 855 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 GPRC5AQ8NFJ5 357 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 TANGO6Q9C0B7 1094 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 IL25Q9H293 177 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 INCENPQ9NQS7 918 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 MORF4L1Q9UBU8 362 aa20.57■□□□□ 0.88
CTDSP1-203ENST00000431127 CAP1Q01518 475 aa20.56■□□□□ 0.88
CTDSP1-203ENST00000431127 KIAA1755Q5JYT7 1200 aa20.56■□□□□ 0.88
CTDSP1-203ENST00000431127 LBX2Q6XYB7 198 aa20.56■□□□□ 0.88
CTDSP1-203ENST00000431127 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
CTDSP1-203ENST00000431127 TRIM47Q96LD4 638 aa20.56■□□□□ 0.88
CTDSP1-203ENST00000431127 GREB1LQ9C091 1923 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-203ENST00000431127 TNRC18O15417 2968 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-203ENST00000431127 RAD21O60216 631 aa20.55■□□□□ 0.88
CTDSP1-203ENST00000431127 RRP12Q5JTH9 1297 aaKnown RBP20.55■□□□□ 0.88
CTDSP1-203ENST00000431127 RBPJLQ9UBG7 517 aa20.55■□□□□ 0.88
CTDSP1-203ENST00000431127 RABGAP1Q9Y3P9 1069 aa20.55■□□□□ 0.88
CTDSP1-203ENST00000431127 TACC3Q9Y6A5 838 aa20.55■□□□□ 0.88
CTDSP1-203ENST00000431127 F5H6K3 240 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 CTGFP29279 349 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 KLRC3Q07444 240 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 CASC1Q6TDU7 716 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 TBC1D10CQ8IV04 446 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 ESR2Q92731 530 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 NBPF3Q9H094 633 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 SRRDQ9UH36 339 aa20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 U3KPZ7 1027 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-203ENST00000431127 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 SPDYE16A6NNV3 312 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 TNPO2O14787 897 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 FLOT1O75955 427 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 ECM2O94769 699 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 ERVK-9P63128 1117 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 ERVK-24P63145 666 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 MB21D1Q8N884 522 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 GMCL1P1Q8NEA9 526 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 COA7Q96BR5 231 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 PAGR1Q9BTK6 254 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 TXNRD2Q9NNW7 524 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 TCP11L1Q9NUJ3 509 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
CTDSP1-203ENST00000431127 NDUFB10O96000 172 aa20.52■□□□□ 0.88
CTDSP1-203ENST00000431127 CCNA1P78396 465 aa20.52■□□□□ 0.88
CTDSP1-203ENST00000431127 CCAR1Q8IX12 1150 aaKnown RBP20.52■□□□□ 0.88
CTDSP1-203ENST00000431127 CNNM2Q9H8M5 875 aa20.52■□□□□ 0.88
CTDSP1-203ENST00000431127 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
CTDSP1-203ENST00000431127 MAPK4P31152 587 aa20.51■□□□□ 0.87
CTDSP1-203ENST00000431127 DSG3P32926 999 aa20.51■□□□□ 0.87
CTDSP1-203ENST00000431127 PTH1RQ03431 593 aa20.51■□□□□ 0.87
CTDSP1-203ENST00000431127 FAM83BQ5T0W9 1011 aa20.51■□□□□ 0.87
CTDSP1-203ENST00000431127 LRRC47Q8N1G4 583 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-203ENST00000431127 ESYT1Q9BSJ8 1104 aa20.51■□□□□ 0.87
CTDSP1-203ENST00000431127 NMT2O60551 498 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 NOVP48745 357 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 CCDC178Q5BJE1 867 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 POTEEQ6S8J3 1075 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 RAET1EQ8TD07 263 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 KRT23Q9C075 422 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 PTCH2Q9Y6C5 1203 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 NEDD4P46934 1319 aa20.5■□□□□ 0.87
CTDSP1-203ENST00000431127 PDE4DIPQ5VU43 2346 aa20.49■□□□□ 0.87
CTDSP1-203ENST00000431127 CDC45O75419 566 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms