RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CPA1P15085 419 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 NEK4P51957 841 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 GTF2A2P52657 109 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 BACE1P56817 501 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 SPP2Q13103 211 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 RCSD1Q6JBY9 416 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 PRRT2Q7Z6L0 340 aaPredicted RBP12.89□□□□□ -0.35
CHD4-202ENST00000430771 CATIPQ7Z7H3 387 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 SGMS1Q86VZ5 419 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 FBXL16Q8N461 479 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 LPAR1Q92633 364 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 MKL1Q969V6 931 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 C12orf42Q96LP6 360 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 KIF2CQ99661 725 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
CHD4-202ENST00000430771 RAD21O60216 631 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 HSPA6P17066 643 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 RCAN1P53805 252 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
CHD4-202ENST00000430771 DEFB115Q30KQ5 88 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
CHD4-202ENST00000430771 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 IGDCC4Q8TDY8 1250 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 BRF1Q92994 677 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
CHD4-202ENST00000430771 SLC12A7Q9Y666 1083 aa12.88□□□□□ -0.35
CHD4-202ENST00000430771 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
CHD4-202ENST00000430771 CALM1P0DP23 149 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 CALM2P0DP24 149 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 CALM3P0DP25 149 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 CETPP11597 493 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 GJA5P36382 358 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 HMGCS2P54868 508 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
CHD4-202ENST00000430771 NOGQ13253 232 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 COL9A3Q14050 684 aaPredicted RBP12.87□□□□□ -0.35
CHD4-202ENST00000430771 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
CHD4-202ENST00000430771 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
CHD4-202ENST00000430771 PARP14Q460N5 1801 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 NID2Q14112 1375 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 FAM155AB1AL88 458 aaPredicted RBP12.86□□□□□ -0.35
CHD4-202ENST00000430771 F5H6K3 240 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 NDUFB10O96000 172 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 VCAM1P19320 739 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 SLC1A4P43007 532 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 MCM2P49736 904 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 AK2P54819 239 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 KLRC3Q07444 240 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 GRM1Q13255 1194 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHD4-202ENST00000430771 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
CHD4-202ENST00000430771 CCL15Q16663 113 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 CYP4F22Q6NT55 531 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
CHD4-202ENST00000430771 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 CAPNS2Q96L46 248 aa12.86□□□□□ -0.35
CHD4-202ENST00000430771 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
CHD4-202ENST00000430771 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
CHD4-202ENST00000430771 GOLGA8AA7E2F4 631 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 ZBTB43O43298 467 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
CHD4-202ENST00000430771 PDHBP11177 359 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 KIF5BP33176 963 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 APOBRQ0VD83 1088 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 GPATCH4Q5T3I0 446 aaKnown RBP12.85□□□□□ -0.35
CHD4-202ENST00000430771 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
CHD4-202ENST00000430771 NUP133Q8WUM0 1156 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 MAP3K14Q99558 947 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
CHD4-202ENST00000430771 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 AGTPBP1Q9UPW5 1226 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 A0A0G2JMZ2 1700 aa12.85□□□□□ -0.35
CHD4-202ENST00000430771 SNHG28P0DPA3 235 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 BMP3P12645 472 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 METAP2P50579 478 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms