RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 NT5DC1Q5TFE4 455 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 MFSD6Q6ZSS7 791 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 FANCBQ8NB91 859 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 LPIN2Q92539 896 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 PNKPQ96T60 521 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 PUF60Q9UHX1 559 aaKnown RBP8.2□□□□□ -1.1
COL28A1-202ENST00000430711 MRFAP1Q9Y605 127 aa8.2□□□□□ -1.1
COL28A1-202ENST00000430711 DUOX1Q9NRD9 1551 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PP2D1A8MPX8 630 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 KIF20AO95235 890 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 KCNJ6P48051 423 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 ERVK-24P63145 666 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PPARAQ07869 468 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 SLC35G1Q2M3R5 365 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 FAM47AQ5JRC9 791 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 SPECC1LQ69YQ0 1117 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 INTS5Q6P9B9 1019 aaKnown RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 SPATA20Q8TB22 786 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 RASGRP4Q8TDF6 673 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 STAG1Q8WVM7 1258 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 SMARCE1Q969G3 411 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 ZNF512BQ96KM6 892 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 CREBZFQ9NS37 354 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 RAI14Q9P0K7 980 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 STK36Q9NRP7 1315 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 TRIM49BA6NDI0 452 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 N4BP1O75113 896 aaKnown RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 STARD3NLO95772 234 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 GYPCP04921 128 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 CYP7A1P22680 504 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 CASP14P31944 242 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 MAP3K9P80192 1104 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 CHRNDQ07001 517 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 TRIM29Q14134 588 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 ALX1Q15699 326 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 CC2D1AQ6P1N0 951 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 OLFM4Q6UX06 510 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 RSRC2Q7L4I2 434 aaKnown RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PTF1AQ7RTS3 328 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 TNFRSF25Q93038 417 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PAGE5Q96GU1 130 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 ZFP91Q96JP5 570 aaPredicted RBP8.19□□□□□ -1.1
COL28A1-202ENST00000430711 PARD6BQ9BYG5 372 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 GDAQ9Y2T3 454 aa8.19□□□□□ -1.1
COL28A1-202ENST00000430711 FAM205AQ6ZU69 1335 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 A0A0U1RQG5 324 aaPredicted RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 CDKL5O76039 1030 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 CDK11BP21127 795 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 PBX1P40424 430 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 MNX1P50219 401 aaPredicted RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 PMS1P54277 932 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 TTF1Q15361 905 aaPredicted RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 TYW1BQ6NUM6 668 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 SRBD1Q8N5C6 995 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 UBXN4Q92575 508 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 PLIN2Q99541 437 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 RIOK1Q9BRS2 568 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 UBXN6Q9BZV1 441 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 CPVLQ9H3G5 476 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 ANKZF1Q9H8Y5 726 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 CTNND2Q9UQB3 1225 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 SRPRBQ9Y5M8 271 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 ADGRG1Q9Y653 693 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 NID2Q14112 1375 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 ARHGAP6O43182 974 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 PLCD1P51178 756 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 SH3RF1Q7Z6J0 888 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 MNS1Q8NEH6 495 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 HINFPQ9BQA5 517 aa8.18□□□□□ -1.1
COL28A1-202ENST00000430711 ADD3Q9UEY8 706 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 REXO2Q9Y3B8 237 aaKnown RBP8.18□□□□□ -1.1
COL28A1-202ENST00000430711 SYNRGQ9UMZ2 1314 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 DEXIO95424 95 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 NTSR2O95665 410 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 OAS2P29728 719 aaKnown RBP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 TPM4P67936 248 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 TROAPQ12815 778 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 KCTD19Q17RG1 926 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 LRRFIP1Q32MZ4 808 aaKnown RBP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 CDKAL1Q5VV42 579 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 KRT27Q7Z3Y8 459 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 JMYQ8N9B5 988 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 GPKOWQ92917 476 aaPredicted RBP eCLIP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 CHP1Q99653 195 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 FUT8Q9BYC5 575 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 FOXP1Q9H334 677 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 TAB2Q9NYJ8 693 aa8.17□□□□□ -1.1
COL28A1-202ENST00000430711 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-202ENST00000430711 LRP2BPQ9P2M1 347 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms