RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 DDAH1O94760 285 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 DPYDQ12882 1025 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 FAM84BQ96KN1 310 aaPredicted RBP15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 WDR24Q96S15 920 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 CARD6Q9BX69 1037 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 CNTNAP5Q8WYK1 1306 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 SYNRGQ9UMZ2 1314 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 TEX33O43247 280 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 ZNF174Q15697 407 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 TTC38Q5R3I4 469 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 GSDMAQ96QA5 445 aa15.14■□□□□ 0.01
SNRNP200-202ENST00000429650 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 USP17L12C9JPN9 530 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 USP17L21D6R901 530 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 CASQ1P31415 396 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 GNG11P61952 73 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 BAZ2BQ9UIF8 2168 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 AKR1B15C9JRZ8 316 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 KCNQ4P56696 695 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 STX17P56962 302 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 BMS1Q14692 1282 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 CDKAL1Q5VV42 579 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 PANX2Q96RD6 677 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 ATP2C1P98194 919 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 EVX2Q03828 476 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 SMYD4Q8IYR2 804 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 FHOD1Q9Y613 1164 aa15.13■□□□□ 0.01
SNRNP200-202ENST00000429650 PPP1R3GB7ZBB8 358 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 PBX1P40424 430 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 MAP3K9P80192 1104 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 PTGDRQ13258 359 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 ORC4O43929 436 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 NMT2O60551 498 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 MTF1Q14872 753 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 MRFAP1Q9Y605 127 aa15.12■□□□□ 0.01
SNRNP200-202ENST00000429650 COL5A3P25940 1745 aaPredicted RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 LAMB1P07942 1786 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 SEMA3EO15041 775 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 TERF2Q15554 542 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 IGSF22Q8N9C0 903 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 CTCFLQ8NI51 663 aaPredicted RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 CELF1Q92879 486 aaKnown RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 ARGLU1Q9NWB6 273 aaPredicted RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 THRAP3Q9Y2W1 955 aaKnown RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 XDHP47989 1333 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 ZRANB2O95218 330 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 KLRK1P26718 216 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 MECOMQ03112 1051 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 RBL2Q08999 1139 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 E2F4Q16254 413 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 CTAGE1Q96RT6 745 aa15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 DCP1AQ9NPI6 582 aaPredicted RBP15.11■□□□□ 0.01
SNRNP200-202ENST00000429650 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 CCDC175P0C221 793 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 PNMA6AP0CW24 399 aaPredicted RBP15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 SCG2P13521 617 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 KARSQ15046 597 aaKnown RBP15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 FAM47AQ5JRC9 791 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 ZNF771Q7L3S4 317 aaPredicted RBP15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 PPFIBP1Q86W92 1011 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 STAMQ92783 540 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 ST7Q9NRC1 585 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 NRAPQ86VF7 1730 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 CLSTN1O94985 981 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 TPM1P09493 284 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 PIK3AP1Q6ZUJ8 805 aa15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 NAA15Q9BXJ9 866 aaKnown RBP15.1■□□□□ 0.01
SNRNP200-202ENST00000429650 TRAPPC10P48553 1259 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 NLRP5P59047 1200 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 TMCO3Q6UWJ1 677 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 RAD9BQ6WBX8 426 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 IQUBQ8NA54 791 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 CRNKL1Q9BZJ0 848 aaKnown RBP15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 CTNND2Q9UQB3 1225 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 MFAP3LO75121 409 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 VEGFAP15692 232 aaPredicted RBP15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 IL17AQ16552 155 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 PFKFB3Q16875 520 aaPredicted RBP15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 FILIP1LQ4L180 1135 aa15.09■□□□□ 0.01
SNRNP200-202ENST00000429650 PDXDC2PQ6P474 469 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms