RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 HAND2P61296 217 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-210ENST00000428861 SH3TC2Q8TF17 1288 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 ARMC5Q96C12 935 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 PAGR1Q9BTK6 254 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 ARHGEF10LQ9HCE6 1279 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
ATG4B-210ENST00000428861 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 GNRH1P01148 92 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 FGRP09769 529 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 ERVK-24P63145 666 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 TFAP4Q01664 338 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 ARHGEF6Q15052 776 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 ZNF333Q96JL9 665 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 PORCNQ9H237 461 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 IL17RBQ9NRM6 502 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 DIAPH3Q9NSV4 1193 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 MTMR4Q9NYA4 1195 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 GJD2Q9UKL4 321 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 MGAMO43451 1857 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 RLFQ13129 1914 aa12.78□□□□□ -0.36
ATG4B-210ENST00000428861 TNPO2O14787 897 aaKnown RBP12.77□□□□□ -0.37
ATG4B-210ENST00000428861 NMT2O60551 498 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 MYCP01106 439 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-210ENST00000428861 FLT3LGP49771 235 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 PDE4BQ07343 736 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-210ENST00000428861 TBC1D10CQ8IV04 446 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 GPRC5AQ8NFJ5 357 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 LPAR1Q92633 364 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-210ENST00000428861 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 FBXO28Q9NVF7 368 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 NYAP2Q9P242 653 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 CLIP2Q9UDT6 1046 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 ZMYM6O95789 1325 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.37
ATG4B-210ENST00000428861 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 F5H6K3 240 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 HIP1O00291 1037 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 NDUFB10O96000 172 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 SLC3A2P08195 630 aaKnown RBP12.76□□□□□ -0.37
ATG4B-210ENST00000428861 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 CHMLP26374 656 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 DSG3P32926 999 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 RGS19P49795 217 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 PRMT2P55345 433 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 KLRC3Q07444 240 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 COG2Q14746 738 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 SLC9C1Q4G0N8 1177 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 LRRC47Q8N1G4 583 aaKnown RBP12.76□□□□□ -0.37
ATG4B-210ENST00000428861 MKL1Q969V6 931 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
ATG4B-210ENST00000428861 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
ATG4B-210ENST00000428861 ORC4O43929 436 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 ELNP15502 786 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 HOXD10P28358 340 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 MTFR1Q15390 333 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 FAM83BQ5T0W9 1011 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 SH2D4AQ9H788 454 aa12.75□□□□□ -0.37
ATG4B-210ENST00000428861 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 NEDD4P46934 1319 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 RAD21O60216 631 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 RANBP6O60518 1105 aaKnown RBP12.74□□□□□ -0.37
ATG4B-210ENST00000428861 FLOT1O75955 427 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 TTLL1O95922 423 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 GRK4P32298 578 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 NOVP48745 357 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 PTH1RQ03431 593 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
ATG4B-210ENST00000428861 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-210ENST00000428861 GPR142Q7Z601 462 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 GTF3C2Q8WUA4 911 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-210ENST00000428861 STAG1Q8WVM7 1258 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 COA7Q96BR5 231 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
ATG4B-210ENST00000428861 MKI67P46013 3256 aaKnown RBP12.73□□□□□ -0.37
ATG4B-210ENST00000428861 TSPY2A6NKD2 308 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 ADCY3O60266 1144 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
ATG4B-210ENST00000428861 TRIM32Q13049 653 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 IRF5Q13568 498 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 TMEM132BQ14DG7 1078 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 MORN1Q5T089 497 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms