RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 VCAM1P19320 739 aa26.31■■□□□ 1.8
PTPN18-205ENST00000428843 HSPA4P34932 840 aa26.31■■□□□ 1.8
PTPN18-205ENST00000428843 CYB5R4Q7L1T6 521 aa26.31■■□□□ 1.8
PTPN18-205ENST00000428843 IQCA1Q86XH1 822 aa26.31■■□□□ 1.8
PTPN18-205ENST00000428843 LRRC47Q8N1G4 583 aaKnown RBP26.31■■□□□ 1.8
PTPN18-205ENST00000428843 GOPCQ9HD26 462 aa26.31■■□□□ 1.8
PTPN18-205ENST00000428843 TSKSQ9UJT2 592 aa26.31■■□□□ 1.8
PTPN18-205ENST00000428843 FOXN1O15353 648 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 CRHR2Q13324 411 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 C8orf34Q49A92 452 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 RASEFQ8IZ41 740 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 SPICE1Q8N0Z3 855 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 KCNB2Q92953 911 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 CFHR5Q9BXR6 569 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 SYNPO2Q9UMS6 1093 aa26.3■■□□□ 1.8
PTPN18-205ENST00000428843 RAD21O60216 631 aa26.29■■□□□ 1.8
PTPN18-205ENST00000428843 ZKSCAN1P17029 563 aaPredicted RBP26.29■■□□□ 1.8
PTPN18-205ENST00000428843 PABPC4Q13310 644 aaKnown RBP eCLIP26.29■■□□□ 1.8
PTPN18-205ENST00000428843 TSGA10IPQ3SY00 556 aa26.29■■□□□ 1.8
PTPN18-205ENST00000428843 LPAR1Q92633 364 aa26.29■■□□□ 1.8
PTPN18-205ENST00000428843 R3HDMLQ9H3Y0 253 aa26.29■■□□□ 1.8
PTPN18-205ENST00000428843 ZFYVE28Q9HCC9 887 aa26.29■■□□□ 1.8
PTPN18-205ENST00000428843 CYP2C8P10632 490 aa26.28■■□□□ 1.8
PTPN18-205ENST00000428843 HOXA7P31268 230 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-205ENST00000428843 CCDC178Q5BJE1 867 aa26.28■■□□□ 1.8
PTPN18-205ENST00000428843 RCSD1Q6JBY9 416 aa26.28■■□□□ 1.8
PTPN18-205ENST00000428843 MB21D2Q8IYB1 491 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-205ENST00000428843 ZSCAN10Q96SZ4 725 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-205ENST00000428843 RPAP3Q9H6T3 665 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-205ENST00000428843 F5H6K3 240 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 SEC24BO95487 1268 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 NDUFB10O96000 172 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 OSBPP22059 807 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 KLRC3Q07444 240 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 TTC14Q96N46 770 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 PARK7Q99497 189 aaKnown RBP26.27■■□□□ 1.8
PTPN18-205ENST00000428843 TMEM47Q9BQJ4 181 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 UBAC1Q9BSL1 405 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 ASCC2Q9H1I8 757 aaPredicted RBP26.27■■□□□ 1.8
PTPN18-205ENST00000428843 PNMA3Q9UL41 463 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 TNKSO95271 1327 aa26.27■■□□□ 1.8
PTPN18-205ENST00000428843 USP17L15C9J2P7 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L13C9JLJ4 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L11C9JVI0 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L18D6R9N7 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L22D6RA61 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L17D6RBQ6 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L19D6RCP7 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L20D6RJB6 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 EIF5BO60841 1220 aaKnown RBP26.26■■□□□ 1.79
PTPN18-205ENST00000428843 TOP1P11387 765 aaKnown RBP26.26■■□□□ 1.79
PTPN18-205ENST00000428843 IRX3P78415 501 aaPredicted RBP26.26■■□□□ 1.79
PTPN18-205ENST00000428843 USP17L24Q0WX57 530 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 COL9A3Q14050 684 aaPredicted RBP26.26■■□□□ 1.79
PTPN18-205ENST00000428843 CHST3Q7LGC8 479 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 DGKHQ86XP1 1220 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 ENAHQ8N8S7 591 aaPredicted RBP26.26■■□□□ 1.79
PTPN18-205ENST00000428843 GMCL1P1Q8NEA9 526 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 SNX14Q9Y5W7 946 aa26.26■■□□□ 1.79
PTPN18-205ENST00000428843 WDR46O15213 610 aaKnown RBP26.25■■□□□ 1.79
PTPN18-205ENST00000428843 HSPA8P11142 646 aaKnown RBP26.25■■□□□ 1.79
PTPN18-205ENST00000428843 ANTXR2P58335 489 aa26.25■■□□□ 1.79
PTPN18-205ENST00000428843 KRT32Q14532 448 aa26.25■■□□□ 1.79
PTPN18-205ENST00000428843 ADCK5Q3MIX3 580 aa26.25■■□□□ 1.79
PTPN18-205ENST00000428843 CATSPERGQ6ZRH7 1159 aa26.25■■□□□ 1.79
PTPN18-205ENST00000428843 ADGRA2Q96PE1 1338 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 TLR2O60603 784 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 MCCP23508 829 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 CTCFP49711 727 aaPredicted RBP26.24■■□□□ 1.79
PTPN18-205ENST00000428843 SEC23AQ15436 765 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 SLFN13Q68D06 897 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 ANKS1AQ92625 1134 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 NEK1Q96PY6 1258 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 TANGO6Q9C0B7 1094 aa26.24■■□□□ 1.79
PTPN18-205ENST00000428843 IFIT3O14879 490 aaKnown RBP26.23■■□□□ 1.79
PTPN18-205ENST00000428843 MCM5P33992 734 aa26.23■■□□□ 1.79
PTPN18-205ENST00000428843 FAM83BQ5T0W9 1011 aa26.23■■□□□ 1.79
PTPN18-205ENST00000428843 NUP88Q99567 741 aaPredicted RBP26.23■■□□□ 1.79
PTPN18-205ENST00000428843 PRC1O43663 620 aa26.22■■□□□ 1.79
PTPN18-205ENST00000428843 SMCR8Q8TEV9 937 aaPredicted RBP26.22■■□□□ 1.79
PTPN18-205ENST00000428843 CHMP4CQ96CF2 233 aa26.22■■□□□ 1.79
PTPN18-205ENST00000428843 P2RX7Q99572 595 aaKnown RBP26.22■■□□□ 1.79
PTPN18-205ENST00000428843 MTMR7Q9Y216 660 aa26.22■■□□□ 1.79
PTPN18-205ENST00000428843 PARP14Q460N5 1801 aa26.22■■□□□ 1.79
PTPN18-205ENST00000428843 RLFQ13129 1914 aa26.22■■□□□ 1.79
PTPN18-205ENST00000428843 GPR25O00155 361 aa26.21■■□□□ 1.79
PTPN18-205ENST00000428843 SART3Q15020 963 aaKnown RBP26.21■■□□□ 1.79
PTPN18-205ENST00000428843 IFIT1BQ5T764 474 aaKnown RBP26.21■■□□□ 1.79
PTPN18-205ENST00000428843 KAT14Q9H8E8 782 aa26.21■■□□□ 1.79
PTPN18-205ENST00000428843 CPA4Q9UI42 421 aa26.21■■□□□ 1.79
PTPN18-205ENST00000428843 ERICH2A1L162 156 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 LBX1P52954 281 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 HERVK_113P62684 666 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 TMEM67Q5HYA8 995 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 C17orf99Q6UX52 265 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 RASGRP2Q7LDG7 609 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 IGDCC4Q8TDY8 1250 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 GMCL1Q96IK5 515 aa26.2■■□□□ 1.78
PTPN18-205ENST00000428843 JAKMIP1Q96N16 626 aaKnown RBP26.2■■□□□ 1.78
PTPN18-205ENST00000428843 FLOT1O75955 427 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms