RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 TOMM22Q9NS69 142 aa25.43■■□□□ 1.66
RPUSD3-205ENST00000427174 A0A0G2JMZ2 1700 aa25.43■■□□□ 1.66
RPUSD3-205ENST00000427174 ZSWIM8A7E2V4 1837 aa25.42■■□□□ 1.66
RPUSD3-205ENST00000427174 PABPC4Q13310 644 aaKnown RBP eCLIP25.42■■□□□ 1.66
RPUSD3-205ENST00000427174 C17orf99Q6UX52 265 aa25.42■■□□□ 1.66
RPUSD3-205ENST00000427174 LPAR1Q92633 364 aa25.42■■□□□ 1.66
RPUSD3-205ENST00000427174 ESR2Q92731 530 aa25.42■■□□□ 1.66
RPUSD3-205ENST00000427174 CLIP2Q9UDT6 1046 aa25.42■■□□□ 1.66
RPUSD3-205ENST00000427174 ATP2B2Q01814 1243 aa25.41■■□□□ 1.66
RPUSD3-205ENST00000427174 STOX1Q6ZVD7 989 aa25.41■■□□□ 1.66
RPUSD3-205ENST00000427174 CNNM2Q9H8M5 875 aa25.41■■□□□ 1.66
RPUSD3-205ENST00000427174 PNMA3Q9UL41 463 aa25.41■■□□□ 1.66
RPUSD3-205ENST00000427174 COL11A1P12107 1806 aaPredicted RBP25.41■■□□□ 1.66
RPUSD3-205ENST00000427174 DOCK3Q8IZD9 2030 aa25.41■■□□□ 1.66
RPUSD3-205ENST00000427174 B4E1Z4 1266 aa25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 KDM4AO75164 1064 aa25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 PPP4R3BQ5MIZ7 849 aa25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 RCSD1Q6JBY9 416 aa25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 CATSPERGQ6ZRH7 1159 aa25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 ZNF296Q8WUU4 475 aaPredicted RBP25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 KRT23Q9C075 422 aa25.4■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L15C9J2P7 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L13C9JLJ4 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L11C9JVI0 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L18D6R9N7 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L22D6RA61 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L17D6RBQ6 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L19D6RCP7 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L20D6RJB6 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 E7EWF7 191 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 SLC27A2O14975 620 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 BCRP11274 1271 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 USP17L24Q0WX57 530 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 CREB3L3Q68CJ9 461 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 RPAP3Q9H6T3 665 aaPredicted RBP25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 GOPCQ9HD26 462 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 ZSWIM5Q9P217 1185 aa25.39■■□□□ 1.66
RPUSD3-205ENST00000427174 WDR46O15213 610 aaKnown RBP25.38■■□□□ 1.65
RPUSD3-205ENST00000427174 OSBPP22059 807 aa25.38■■□□□ 1.65
RPUSD3-205ENST00000427174 POTEEQ6S8J3 1075 aa25.38■■□□□ 1.65
RPUSD3-205ENST00000427174 SPICE1Q8N0Z3 855 aa25.38■■□□□ 1.65
RPUSD3-205ENST00000427174 GMCL1P1Q8NEA9 526 aa25.38■■□□□ 1.65
RPUSD3-205ENST00000427174 P2RX7Q99572 595 aaKnown RBP25.38■■□□□ 1.65
RPUSD3-205ENST00000427174 F5H6K3 240 aa25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 FKTNO75072 461 aa25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 KLRC3Q07444 240 aa25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 LRRC47Q8N1G4 583 aaKnown RBP25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 CPA4Q9UI42 421 aa25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 STX8Q9UNK0 236 aa25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
RPUSD3-205ENST00000427174 NDUFB10O96000 172 aa25.36■■□□□ 1.65
RPUSD3-205ENST00000427174 HERVK_113P62684 666 aa25.36■■□□□ 1.65
RPUSD3-205ENST00000427174 IRX3P78415 501 aaPredicted RBP25.36■■□□□ 1.65
RPUSD3-205ENST00000427174 LBX2Q6XYB7 198 aa25.36■■□□□ 1.65
RPUSD3-205ENST00000427174 CYB5R4Q7L1T6 521 aa25.36■■□□□ 1.65
RPUSD3-205ENST00000427174 TTC14Q96N46 770 aa25.36■■□□□ 1.65
RPUSD3-205ENST00000427174 EPB41L2O43491 1005 aaKnown RBP25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 GCLCP48506 637 aaPredicted RBP25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 CAP1Q01518 475 aa25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 SP3Q02447 781 aa25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 SMCR8Q8TEV9 937 aaPredicted RBP25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 ANKS1AQ92625 1134 aa25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 KCNB2Q92953 911 aa25.35■■□□□ 1.65
RPUSD3-205ENST00000427174 REC8O95072 547 aa25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 TSGA10IPQ3SY00 556 aa25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 DGKHQ86XP1 1220 aa25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 MB21D2Q8IYB1 491 aaPredicted RBP25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 NCOA7Q8NI08 942 aa25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 TMEM47Q9BQJ4 181 aa25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 ZKSCAN3Q9BRR0 538 aa25.34■■□□□ 1.65
RPUSD3-205ENST00000427174 SPDYE16A6NNV3 312 aaPredicted RBP25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 TOP1P11387 765 aaKnown RBP25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 TRDNQ13061 729 aa25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 COL9A3Q14050 684 aaPredicted RBP25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 FAM110CQ1W6H9 321 aa25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 CCDC178Q5BJE1 867 aa25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 IQCA1Q86XH1 822 aa25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 RASEFQ8IZ41 740 aa25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 ZSCAN10Q96SZ4 725 aaPredicted RBP25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 MORF4L1Q9UBU8 362 aa25.33■■□□□ 1.65
RPUSD3-205ENST00000427174 MYPNQ86TC9 1320 aa25.33■■□□□ 1.64
RPUSD3-205ENST00000427174 HTTP42858 3142 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 COG2Q14746 738 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 SEC23AQ15436 765 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 FAM83BQ5T0W9 1011 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 RNF20Q5VTR2 975 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 ENAHQ8N8S7 591 aaPredicted RBP25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 GMCL1Q96IK5 515 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 NUP88Q99567 741 aaPredicted RBP25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 TANGO6Q9C0B7 1094 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 RBPJLQ9UBG7 517 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 TNKSO95271 1327 aa25.32■■□□□ 1.64
RPUSD3-205ENST00000427174 HSPA4P34932 840 aa25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 ANTXR2P58335 489 aa25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 LACTBP83111 547 aaPredicted RBP25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 SLFN13Q68D06 897 aa25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 ANKRD13CQ8N6S4 541 aa25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 GTF3C2Q8WUA4 911 aaPredicted RBP25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 TXNRD2Q9NNW7 524 aa25.31■■□□□ 1.64
RPUSD3-205ENST00000427174 ADAMTS5Q9UNA0 930 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms