RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 ZNF75DP51815 510 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 HS1BP3Q53T59 392 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 MCUQ8NE86 351 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 BUB1O43683 1085 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 ABCB4P21439 1286 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 STRN3Q13033 797 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 GRAMD4Q6IC98 578 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 CBX8Q9HC52 389 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 SUPT3HO75486 399 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 EEF1B2P24534 225 aaKnown RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 ACTN3Q08043 901 aaPredicted RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 ADCY8P40145 1251 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 ZKSCAN8Q15776 578 aaPredicted RBP12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 SCYL2Q6P3W7 929 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
POLR2J4-202ENST00000427076 DAPK1P53355 1430 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 KLHL30Q0D2K2 578 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 PAK1Q13153 545 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 TRIM14Q14142 442 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 EP400NLQ6ZTU2 488 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 BLZF1Q9H2G9 400 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 LUC7L3O95232 432 aaKnown RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 HNRNPCP07910 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 SLC8A1P32418 973 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 GNPTABQ3T906 1256 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 CNNM4Q6P4Q7 775 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 RSBN1LQ6PCB5 846 aaPredicted RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 HIPK4Q8NE63 616 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 A6NNZ2 444 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 PCYT1AP49585 367 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 TUBB8Q3ZCM7 444 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 TMOD4Q9NZQ9 345 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 UBAP1LF5GYI3 381 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 CCDC159P0C7I6 412 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 SMTNP53814 917 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 UBE3AQ05086 875 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 PLCB4Q15147 1175 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 STAMQ92783 540 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 CCDC138Q96M89 665 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 NLRC4Q9NPP4 1024 aa12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
POLR2J4-202ENST00000427076 TTC4O95801 387 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 GNA11P29992 359 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 IFRD2Q12894 506 aaPredicted RBP12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 GDAP1Q8TB36 358 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 FAM173BQ6P4H8 233 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 U2AF1L4Q8WU68 220 aaKnown RBP12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 CCDC141Q6ZP82 1450 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 KCNK3O14649 394 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 ERFP50548 548 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 KRT81Q14533 505 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 RRAGAQ7L523 313 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 BRAPQ7Z569 592 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 ABL1P00519 1130 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 KCNH3Q9ULD8 1083 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 SFMBT2Q5VUG0 894 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
POLR2J4-202ENST00000427076 CCDC85BQ15834 202 aaPredicted RBP12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 KAZNQ674X7 775 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 ST7Q9NRC1 585 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 LPXNO60711 386 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 NELFBQ8WX92 580 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 P3H4Q92791 437 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 SART1O43290 800 aaKnown RBP12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 GCNT3O95395 438 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 RAP1GDS1P52306 607 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 PRKG1Q13976 671 aa12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 ZYXQ15942 572 aaKnown RBP12.49□□□□□ -0.41
POLR2J4-202ENST00000427076 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms