RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 CWC27Q6UX04 472 aaKnown RBP16.24■□□□□ 0.19
SNX3-204ENST00000426155 SH3TC2Q8TF17 1288 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 PAGR1Q9BTK6 254 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 IL25Q9H293 177 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 ARHGEF10LQ9HCE6 1279 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 SRRDQ9UH36 339 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 USP17L15C9J2P7 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L13C9JLJ4 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L11C9JVI0 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L18D6R9N7 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L22D6RA61 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L17D6RBQ6 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L19D6RCP7 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L20D6RJB6 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 TNPO2O14787 897 aaKnown RBP16.23■□□□□ 0.19
SNX3-204ENST00000426155 MYCP01106 439 aaPredicted RBP16.23■□□□□ 0.19
SNX3-204ENST00000426155 HSPD1P10809 573 aaKnown RBP16.23■□□□□ 0.19
SNX3-204ENST00000426155 USP17L24Q0WX57 530 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 VCPKMTQ9H867 229 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 MORF4L1Q9UBU8 362 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 TMX2Q9Y320 296 aa16.23■□□□□ 0.19
SNX3-204ENST00000426155 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
SNX3-204ENST00000426155 CNMDO75829 334 aa16.22■□□□□ 0.19
SNX3-204ENST00000426155 Q3C1V9 767 aa16.22■□□□□ 0.19
SNX3-204ENST00000426155 SLC9C1Q4G0N8 1177 aa16.22■□□□□ 0.19
SNX3-204ENST00000426155 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
SNX3-204ENST00000426155 KANSL2Q9H9L4 492 aa16.22■□□□□ 0.19
SNX3-204ENST00000426155 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 RAD21O60216 631 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 GNRH1P01148 92 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 FGAP02671 866 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 HAND2P61296 217 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 RAET1EQ8TD07 263 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 ARMC5Q96C12 935 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNX3-204ENST00000426155 PLIN4Q96Q06 1357 aa16.21■□□□□ 0.19
SNX3-204ENST00000426155 TNRC18O15417 2968 aaPredicted RBP16.21■□□□□ 0.19
SNX3-204ENST00000426155 FLT3LGP49771 235 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 ERVK-9P63128 1117 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 ERVK-24P63145 666 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 PDE4BQ07343 736 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 TICAM2Q86XR7 235 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
SNX3-204ENST00000426155 GPRC5AQ8NFJ5 357 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 ZNF333Q96JL9 665 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 NUP88Q99567 741 aaPredicted RBP16.2■□□□□ 0.18
SNX3-204ENST00000426155 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 PORCNQ9H237 461 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 SH2D4AQ9H788 454 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
SNX3-204ENST00000426155 KIAA0100Q14667 2235 aaKnown RBP16.19■□□□□ 0.18
SNX3-204ENST00000426155 POTEFA5A3E0 1075 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
SNX3-204ENST00000426155 TSPY3P0CV98 308 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 TSPY8P0CW00 308 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 ELNP15502 786 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 HOXD10P28358 340 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 PRMT2P55345 433 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 TFAP4Q01664 338 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 ALX1Q15699 326 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 LRRC47Q8N1G4 583 aaKnown RBP16.19■□□□□ 0.18
SNX3-204ENST00000426155 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 LPAR1Q92633 364 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 ZNF287Q9HBT7 754 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 FBXO28Q9NVF7 368 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 ANAPC4Q9UJX5 808 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
SNX3-204ENST00000426155 NMT2O60551 498 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 FLOT1O75955 427 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
SNX3-204ENST00000426155 FAM83BQ5T0W9 1011 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 COA7Q96BR5 231 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 CHMP4CQ96CF2 233 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 ATG4CQ96DT6 458 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 NYAP2Q9P242 653 aa16.18■□□□□ 0.18
SNX3-204ENST00000426155 HIP1O00291 1037 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 WDR46O15213 610 aaKnown RBP16.17■□□□□ 0.18
SNX3-204ENST00000426155 NDUFB10O96000 172 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 GRK4P32298 578 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 COG2Q14746 738 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 MTFR1Q15390 333 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 RRP12Q5JTH9 1297 aaKnown RBP16.17■□□□□ 0.18
SNX3-204ENST00000426155 LBX2Q6XYB7 198 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 RASGRP2Q7LDG7 609 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 GTF3C2Q8WUA4 911 aaPredicted RBP16.17■□□□□ 0.18
SNX3-204ENST00000426155 GOPCQ9HD26 462 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 RABGAP1Q9Y3P9 1069 aa16.17■□□□□ 0.18
SNX3-204ENST00000426155 TSPY2A6NKD2 308 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 F5H6K3 240 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms