RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 IQCA1Q86XH1 822 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
CDH1-202ENST00000422392 ERICH4A6NGS2 130 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 CDC25AP30304 524 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 TTC38Q5R3I4 469 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 ARGLU1Q9NWB6 273 aaPredicted RBP17.95■□□□□ 0.46
CDH1-202ENST00000422392 ADD3Q9UEY8 706 aaKnown RBP17.95■□□□□ 0.46
CDH1-202ENST00000422392 JAG2Q9Y219 1238 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 CASP14P31944 242 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 KCNQ4P56696 695 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 TNFRSF25Q93038 417 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 XDHP47989 1333 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 A0A1B0GUL6 1792 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 PPFIBP1Q86W92 1011 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
CDH1-202ENST00000422392 CNTNAP5Q8WYK1 1306 aa17.94■□□□□ 0.46
CDH1-202ENST00000422392 GOLGA6L9A6NEM1 432 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 CCDC175P0C221 793 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 MCM7P33993 719 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 CDKAL1Q5VV42 579 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 ANKRD18AQ8IVF6 992 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 GNL3LQ9NVN8 582 aaKnown RBP17.93■□□□□ 0.46
CDH1-202ENST00000422392 MAPK8IP1Q9UQF2 711 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 SASH3O75995 380 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 ABL1P00519 1130 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 CYP2D6P10635 497 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 FXR1P51114 621 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDH1-202ENST00000422392 IL17AQ16552 155 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 ZBTB9Q96C00 473 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 FAM84BQ96KN1 310 aaPredicted RBP17.93■□□□□ 0.46
CDH1-202ENST00000422392 MTRQ99707 1265 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 ADGRG1Q9Y653 693 aa17.93■□□□□ 0.46
CDH1-202ENST00000422392 TFRCP02786 760 aaKnown RBP17.92■□□□□ 0.46
CDH1-202ENST00000422392 PBX1P40424 430 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 CELF1Q92879 486 aaKnown RBP17.92■□□□□ 0.46
CDH1-202ENST00000422392 FERMT2Q96AC1 680 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 NOL10Q9BSC4 688 aaKnown RBP17.92■□□□□ 0.46
CDH1-202ENST00000422392 LAMB2P55268 1798 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 GYPCP04921 128 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 GSDMAQ96QA5 445 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 PANX2Q96RD6 677 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 BRMS1Q9HCU9 246 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 RBM28Q9NW13 759 aaKnown RBP17.92■□□□□ 0.46
CDH1-202ENST00000422392 COL14A1Q05707 1796 aaKnown RBP17.92■□□□□ 0.46
CDH1-202ENST00000422392 DLEC1Q9Y238 1755 aa17.92■□□□□ 0.46
CDH1-202ENST00000422392 RNF225M0QZC1 329 aaPredicted RBP17.91■□□□□ 0.46
CDH1-202ENST00000422392 POLR3GO15318 223 aaPredicted RBP17.91■□□□□ 0.46
CDH1-202ENST00000422392 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
CDH1-202ENST00000422392 DDB1Q16531 1140 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 RRAGBQ5VZM2 374 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 CCDC34Q96HJ3 373 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 VPS16Q9H269 839 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 MINPP1Q9UNW1 487 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 MFAP3LO75121 409 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 NLRP5P59047 1200 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 RSRC2Q7L4I2 434 aaKnown RBP17.91■□□□□ 0.46
CDH1-202ENST00000422392 ACRBPQ8NEB7 543 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 PARD6BQ9BYG5 372 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
CDH1-202ENST00000422392 TBC1D8O95759 1140 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 MECOMQ03112 1051 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 E2F4Q16254 413 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
CDH1-202ENST00000422392 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 PUF60Q9UHX1 559 aaKnown RBP17.9■□□□□ 0.46
CDH1-202ENST00000422392 KCNQ2O43526 872 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 PRDX5P30044 214 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 KRT31Q15323 416 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
CDH1-202ENST00000422392 CTCFLQ8NI51 663 aaPredicted RBP17.9■□□□□ 0.46
CDH1-202ENST00000422392 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
CDH1-202ENST00000422392 ZCCHC17Q9NP64 241 aaKnown RBP17.9■□□□□ 0.46
CDH1-202ENST00000422392 WNK3Q9BYP7 1800 aa17.9■□□□□ 0.46
CDH1-202ENST00000422392 ADAMTS2O95450 1211 aa17.89■□□□□ 0.46
CDH1-202ENST00000422392 RASGRP4Q8TDF6 673 aa17.89■□□□□ 0.46
CDH1-202ENST00000422392 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.46
CDH1-202ENST00000422392 DCP1AQ9NPI6 582 aaPredicted RBP17.89■□□□□ 0.46
CDH1-202ENST00000422392 TAB2Q9NYJ8 693 aa17.89■□□□□ 0.46
CDH1-202ENST00000422392 N4BP3O15049 544 aa17.89■□□□□ 0.45
CDH1-202ENST00000422392 SCG2P13521 617 aa17.89■□□□□ 0.45
CDH1-202ENST00000422392 FILIP1LQ4L180 1135 aa17.89■□□□□ 0.45
CDH1-202ENST00000422392 ZNF569Q5MCW4 686 aa17.89■□□□□ 0.45
CDH1-202ENST00000422392 PDXDC2PQ6P474 469 aa17.89■□□□□ 0.45
CDH1-202ENST00000422392 GPR161Q8N6U8 529 aaKnown RBP17.89■□□□□ 0.45
CDH1-202ENST00000422392 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
CDH1-202ENST00000422392 DDAH1O94760 285 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 FGRP09769 529 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 IQUBQ8NA54 791 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
CDH1-202ENST00000422392 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.88■□□□□ 0.45
CDH1-202ENST00000422392 GDAQ9Y2T3 454 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms