RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 LEFTY1O75610 366 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 ITGB2P05107 769 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 H2AFB1P0C5Y9 115 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 H2AFB2P0C5Z0 115 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 FAM87AP0C7U9 286 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 CYP27A1Q02318 531 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 IFRD2Q12894 506 aaPredicted RBP6.94□□□□□ -1.3
VPS8-202ENST00000421069 CYP27C1Q4G0S4 372 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 RNF43Q68DV7 783 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 TBC1D32Q96NH3 1257 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 TPX2Q9ULW0 747 aaKnown RBP6.94□□□□□ -1.3
VPS8-202ENST00000421069 TBX22Q9Y458 520 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
VPS8-202ENST00000421069 C9IYK1 514 aa6.93□□□□□ -1.3
VPS8-202ENST00000421069 IGF2BP3O00425 579 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS8-202ENST00000421069 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
VPS8-202ENST00000421069 SUSD5O60279 629 aa6.93□□□□□ -1.3
VPS8-202ENST00000421069 CANXP27824 592 aaKnown RBP6.93□□□□□ -1.3
VPS8-202ENST00000421069 ADMP35318 185 aa6.93□□□□□ -1.3
VPS8-202ENST00000421069 C22orf34Q6ZV56 151 aa6.93□□□□□ -1.3
VPS8-202ENST00000421069 CCDC144CPQ8IYA2 1237 aa6.93□□□□□ -1.3
VPS8-202ENST00000421069 MKRN2Q9H000 416 aaKnown RBP6.93□□□□□ -1.3
VPS8-202ENST00000421069 PRDM5Q9NQX1 630 aaPredicted RBP6.93□□□□□ -1.3
VPS8-202ENST00000421069 GTF2IRD1Q9UHL9 959 aa6.93□□□□□ -1.3
VPS8-202ENST00000421069 ANKRD34BA5PLL1 514 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 GSC2O15499 205 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 AUHQ13825 339 aaKnown RBP6.92□□□□□ -1.3
VPS8-202ENST00000421069 NBPF9Q3BBW0 867 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 MTERF2Q49AM1 385 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 AXDND1Q5T1B0 1012 aaPredicted RBP6.92□□□□□ -1.3
VPS8-202ENST00000421069 SFRP5Q5T4F7 317 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 TDRD10Q5VZ19 366 aaKnown RBP6.92□□□□□ -1.3
VPS8-202ENST00000421069 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 ZNF512BQ96KM6 892 aaPredicted RBP6.92□□□□□ -1.3
VPS8-202ENST00000421069 DNAJC7Q99615 494 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 HAUS7Q99871 368 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 SUSD2Q9UGT4 822 aa6.92□□□□□ -1.3
VPS8-202ENST00000421069 CBFA2T2O43439 604 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 TP53P04637 393 aaPredicted RBP6.91□□□□□ -1.3
VPS8-202ENST00000421069 TCEAL1Q15170 157 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 HEATR6Q6AI08 1181 aaKnown RBP6.91□□□□□ -1.3
VPS8-202ENST00000421069 JAZF1Q86VZ6 243 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 C7orf61Q8IZ16 206 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 APBA2Q99767 749 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 KLHL25Q9H0H3 589 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
VPS8-202ENST00000421069 A0A087WZG4 1122 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 EPHX1P07099 455 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 NFIAQ12857 509 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 CPSF6Q16630 551 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS8-202ENST00000421069 SLC10A6Q3KNW5 377 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 DUSP27Q5VZP5 1158 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 JMYQ8N9B5 988 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 SGSM3Q96HU1 749 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 MFSD14AQ96MC6 490 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 HEXIM2Q96MH2 286 aaKnown RBP6.9□□□□□ -1.3
VPS8-202ENST00000421069 DBNDD2Q9BQY9 259 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 METTL22Q9BUU2 404 aaPredicted RBP6.9□□□□□ -1.3
VPS8-202ENST00000421069 GBP3Q9H0R5 595 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 KCNH3Q9ULD8 1083 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 PCDHB12Q9Y5F1 795 aa6.9□□□□□ -1.3
VPS8-202ENST00000421069 FAM170BA6NMN3 283 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 SHOXO15266 292 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 F13BP05160 661 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 ZNF865P0CJ78 1059 aaPredicted RBP6.89□□□□□ -1.31
VPS8-202ENST00000421069 CD247P20963 164 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 SPATC1Q76KD6 591 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
VPS8-202ENST00000421069 LILRB2Q8N423 598 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 FBXL6Q8N531 539 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
VPS8-202ENST00000421069 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 FAM86C1Q9NVL1 165 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 WHRNQ9P202 907 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 ZNF451Q9Y4E5 1061 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 CNTNAP4Q9C0A0 1308 aa6.89□□□□□ -1.31
VPS8-202ENST00000421069 KDM2BQ8NHM5 1336 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 AGRPO00253 132 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 LRRN2O75325 713 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 PPM1BO75688 479 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 IGLV1-40P01703 118 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 SSRP1Q08945 709 aaKnown RBP6.88□□□□□ -1.31
VPS8-202ENST00000421069 LONRF2Q1L5Z9 754 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 ZNF765Q7L2R6 523 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
VPS8-202ENST00000421069 NLGN1Q8N2Q7 840 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 ZNF513Q8N8E2 541 aaPredicted RBP6.88□□□□□ -1.31
VPS8-202ENST00000421069 DTWD2Q8NBA8 298 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 PIWIL2Q8TC59 973 aaKnown RBP6.88□□□□□ -1.31
VPS8-202ENST00000421069 THAP3Q8WTV1 239 aaPredicted RBP6.88□□□□□ -1.31
VPS8-202ENST00000421069 Q96M66 194 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 SPATA9Q9BWV2 254 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 GP6Q9HCN6 339 aa6.88□□□□□ -1.31
VPS8-202ENST00000421069 ATG3Q9NT62 314 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms