RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 SPP2Q13103 211 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 PPIL2Q13356 520 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
SYNC-203ENST00000417633 KLF18A0A0U1RQI7 1052 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
SYNC-203ENST00000417633 APLP1P51693 650 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 USP14P54578 494 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 SYNE3Q6ZMZ3 975 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 ZSCAN31Q96LW9 406 aaPredicted RBP13.53□□□□□ -0.24
SYNC-203ENST00000417633 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 GOPCQ9HD26 462 aa13.53□□□□□ -0.24
SYNC-203ENST00000417633 F5H6K3 240 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 IRF6O14896 467 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 CALM1P0DP23 149 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 CALM2P0DP24 149 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 CALM3P0DP25 149 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 GJA5P36382 358 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 KLRC3Q07444 240 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 PPP2R5BQ15173 497 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
SYNC-203ENST00000417633 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 WNK4Q96J92 1243 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 C12orf42Q96LP6 360 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
SYNC-203ENST00000417633 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 RBM19Q9Y4C8 960 aaKnown RBP13.52□□□□□ -0.25
SYNC-203ENST00000417633 NID2Q14112 1375 aa13.52□□□□□ -0.25
SYNC-203ENST00000417633 PTPRFP10586 1907 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 ZBTB43O43298 467 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 PFKFB2O60825 505 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
SYNC-203ENST00000417633 PDHBP11177 359 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 ME3Q16798 604 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 KIAA1755Q5JYT7 1200 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 FANCBQ8NB91 859 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 LPAR1Q92633 364 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 FEZ1Q99689 392 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
SYNC-203ENST00000417633 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
SYNC-203ENST00000417633 A0A0G2JLL6 359 aaPredicted RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 PALM3A6NDB9 673 aaPredicted RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 NDUFB10O96000 172 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 ZNF157P51786 506 aaPredicted RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 MTMR2Q13614 643 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 GRM4Q14833 912 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 NOL8Q76FK4 1167 aaKnown RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 PRRT2Q7Z6L0 340 aaPredicted RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 CCDC102AQ96A19 550 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 TMX3Q96JJ7 454 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
SYNC-203ENST00000417633 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
SYNC-203ENST00000417633 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 GOLGA8BA8MQT2 603 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
SYNC-203ENST00000417633 LARGE1O95461 756 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
SYNC-203ENST00000417633 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 KIF5BP33176 963 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 SLC1A4P43007 532 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYNC-203ENST00000417633 GTF2A2P52657 109 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 HMGCS2P54868 508 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 SNAPC2Q13487 334 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 MICU3Q86XE3 530 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
SYNC-203ENST00000417633 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
SYNC-203ENST00000417633 TMOD4Q9NZQ9 345 aa13.49□□□□□ -0.25
SYNC-203ENST00000417633 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
SYNC-203ENST00000417633 ABT1Q9ULW3 272 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms