RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 MTMR2Q13614 643 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
SEC22C-205ENST00000417572 RGMBQ6NW40 437 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 PNMA1Q8ND90 353 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 WNK4Q96J92 1243 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 FEZ1Q99689 392 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 KIAA1683Q9H0B3 1180 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
SEC22C-205ENST00000417572 ATAD5Q96QE3 1844 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 F5H6K3 240 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 RAD21O60216 631 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 EVCP57679 992 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 KLRC3Q07444 240 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 KIAA1755Q5JYT7 1200 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 CATIPQ7Z7H3 387 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 RAB11FIP4Q86YS3 637 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 ZNF654Q8IZM8 581 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 MYL10Q9BUA6 226 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 SH2D4AQ9H788 454 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 EMILIN3Q9NT22 766 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 TPCN1Q9ULQ1 816 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 NAP1L2Q9ULW6 460 aaPredicted RBP15.21■□□□□ 0.03
SEC22C-205ENST00000417572 SYNPO2Q9UMS6 1093 aa15.21■□□□□ 0.03
SEC22C-205ENST00000417572 C19orf81C9J6K1 198 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 CXCL11O14625 94 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 TROAPQ12815 778 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 MKRN3Q13064 507 aaKnown RBP15.2■□□□□ 0.02
SEC22C-205ENST00000417572 DGKZQ13574 1117 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 SPRYD7Q5W111 196 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 SLFN13Q68D06 897 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 APOA5Q6Q788 366 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 GMCL1P1Q8NEA9 526 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 VCPKMTQ9H867 229 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 KCNH4Q9UQ05 1017 aa15.2■□□□□ 0.02
SEC22C-205ENST00000417572 NDUFB10O96000 172 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 RXRAP19793 462 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 PDIA3P30101 505 aaKnown RBP15.19■□□□□ 0.02
SEC22C-205ENST00000417572 USP14P54578 494 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 HMGCS2P54868 508 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 USP17L2Q6R6M4 530 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 RASGRP2Q7LDG7 609 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 RASAL3Q86YV0 1011 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 SPICE1Q8N0Z3 855 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 ZNF274Q96GC6 653 aaPredicted RBP15.19■□□□□ 0.02
SEC22C-205ENST00000417572 HHIPL1Q96JK4 782 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 LIMCH1Q9UPQ0 1083 aa15.19■□□□□ 0.02
SEC22C-205ENST00000417572 ZBTB43O43298 467 aa15.18■□□□□ 0.02
SEC22C-205ENST00000417572 DDAH1O94760 285 aa15.18■□□□□ 0.02
SEC22C-205ENST00000417572 PDHBP11177 359 aa15.18■□□□□ 0.02
SEC22C-205ENST00000417572 ME3Q16798 604 aa15.18■□□□□ 0.02
SEC22C-205ENST00000417572 MICU3Q86XE3 530 aa15.18■□□□□ 0.02
SEC22C-205ENST00000417572 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
SEC22C-205ENST00000417572 A0A0G2JLL6 359 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 LARGE1O95461 756 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 SLC10A3P09131 477 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CALM1P0DP23 149 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CALM2P0DP24 149 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CALM3P0DP25 149 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 ZBTB48P10074 688 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 MCM2P49736 904 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 STK3Q13188 491 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 SNAPC2Q13487 334 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 DEFB115Q30KQ5 88 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 PRRT2Q7Z6L0 340 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CCDC144CPQ8IYA2 1237 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 SNX21Q969T3 373 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 FAM155AB1AL88 458 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 SNHG28P0DPA3 235 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 SLC1A4P43007 532 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CCT2P78371 535 aaKnown RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 CYP4F22Q6NT55 531 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 FANCBQ8NB91 859 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 DCAF4Q8WV16 495 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 LPAR1Q92633 364 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 GMCL1Q96IK5 515 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 C12orf42Q96LP6 360 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 ZSCAN31Q96LW9 406 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
SEC22C-205ENST00000417572 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
SEC22C-205ENST00000417572 RASSF10A6NK89 507 aa15.16■□□□□ 0.02
SEC22C-205ENST00000417572 GOLGA8AA7E2F4 631 aa15.16■□□□□ 0.02
SEC22C-205ENST00000417572 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
SEC22C-205ENST00000417572 GOLGA8HP0CJ92 632 aa15.16■□□□□ 0.02
SEC22C-205ENST00000417572 BMP3P12645 472 aa15.16■□□□□ 0.02
SEC22C-205ENST00000417572 VCAM1P19320 739 aa15.16■□□□□ 0.02
SEC22C-205ENST00000417572 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms