RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 ERCC3P19447 782 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 HOXA10P31260 410 aaPredicted RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 SSR1P43307 286 aaKnown RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 CORO7P57737 925 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 GSDMDP57764 484 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 ELF2Q15723 593 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC93Q567U6 631 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 TTC22Q5TAA0 569 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 TMEM164Q5U3C3 297 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 LRCH2Q5VUJ6 765 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 SARM1Q6SZW1 724 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 NFXL1Q6ZNB6 911 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 NCAPG2Q86XI2 1143 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 DRC7Q8IY82 874 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 EFCAB13Q8IY85 973 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 TMEM57Q8N5G2 664 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 GPATCH11Q8N954 259 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 ABTB2Q8N961 1025 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 SPC24Q8NBT2 197 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 ANKRD20A12PQ8NF67 263 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 TDRD7Q8NHU6 1098 aaKnown RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 TBC1D22AQ8WUA7 517 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 SSH1Q8WYL5 1049 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 RTF1Q92541 710 aaKnown RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 CHMP4CQ96CF2 233 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 NUDT16Q96DE0 195 aaKnown RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 MRFAP1L1Q96HT8 127 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 DRC1Q96MC2 740 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 MKNK1Q9BUB5 465 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 CFDP1Q9UEE9 299 aaPredicted RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 NOB1Q9ULX3 412 aaKnown RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 RNF114Q9Y508 228 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 PRDM15P57071 1507 aaPredicted RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 HMGXB3Q12766 1538 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 MAGI3Q5TCQ9 1506 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 EIF4G3O43432 1585 aaKnown RBP4.4□□□□□ -1.71
LINC01349-201ENST00000416343 RTL1A6NKG5 1358 aa4.4□□□□□ -1.71
LINC01349-201ENST00000416343 NOS1P29475 1434 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 KIF21AQ7Z4S6 1674 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ADGRL1O94910 1474 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 A0A087WUV0 522 aaPredicted RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ZBTB7CA1YPR0 619 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 EIF3CLB5ME19 914 aaKnown RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 GOLIM4O00461 696 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 U2SURPO15042 1029 aaKnown RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 AP5Z1O43299 807 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 NRDCO43847 1150 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 TIAF1O95411 115 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 PRNPP04156 253 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ZSCAN22P10073 491 aaPredicted RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ACPPP15309 386 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 LIG1P18858 919 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 NEK4P51957 841 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 EIF5P55010 431 aaKnown RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 SMC1AQ14683 1233 aaKnown RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 MAP3K11Q16584 847 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 MSMPQ1L6U9 139 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC158Q5M9N0 1113 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 HGSNATQ68CP4 663 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 TICAM2Q86XR7 235 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ERC1Q8IUD2 1116 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 LRRC8AQ8IWT6 810 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 CCAR2Q8N163 923 aaKnown RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 C1orf127Q8N9H9 656 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 NEK11Q8NG66 645 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 UBXN4Q92575 508 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 GTF3C6Q969F1 213 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 SMARCE1Q969G3 411 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ZBTB9Q96C00 473 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 HHIPQ96QV1 700 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 EIF3CQ99613 913 aaKnown RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 BCL2L13Q9BXK5 485 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 TMPRSS13Q9BYE2 586 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 TRIM5Q9C035 493 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 CHRDQ9H2X0 955 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 DCTPP1Q9H773 170 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ORC3Q9UBD5 711 aaPredicted RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 ZNF644Q9H582 1327 aaPredicted RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 PIK3R4Q99570 1358 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 RPAP1Q9BWH6 1393 aaPredicted RBP4.39□□□□□ -1.71
LINC01349-201ENST00000416343 CC2D2AQ9P2K1 1620 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 CADPSQ9ULU8 1353 aa4.39□□□□□ -1.71
LINC01349-201ENST00000416343 PDS5BQ9NTI5 1447 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 MYOM2P54296 1465 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 SHANK2Q9UPX8 1470 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC189A1A4V9 331 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 EFCAB8A8MWE9 144 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 WDR64B1ANS9 1081 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 PDE2AO00408 941 aaPredicted RBP4.38□□□□□ -1.71
LINC01349-201ENST00000416343 POLR3GO15318 223 aaPredicted RBP4.38□□□□□ -1.71
LINC01349-201ENST00000416343 TUBBP07437 444 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 TSPY4P0CV99 314 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 TSPY10P0CW01 314 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 SKILP12757 684 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 GSPT1P15170 499 aaKnown RBP4.38□□□□□ -1.71
LINC01349-201ENST00000416343 GYS2P54840 703 aa4.38□□□□□ -1.71
LINC01349-201ENST00000416343 SETQ01105 290 aaPredicted RBP4.38□□□□□ -1.71
LINC01349-201ENST00000416343 ZKSCAN8Q15776 578 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms