RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
TRA2B-204ENST00000414862 CLEC4MQ9H2X3 399 aaPredicted RBP10.73□□□□□ -0.69
TRA2B-204ENST00000414862 ZNF576Q9H609 170 aa10.73□□□□□ -0.69
TRA2B-204ENST00000414862 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
TRA2B-204ENST00000414862 A0A0A0MRY4 1105 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 MMP10P09238 476 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 USP17L7P0C7H9 530 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 RAC1P63000 192 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 TRIM28Q13263 835 aaKnown RBP10.72□□□□□ -0.69
TRA2B-204ENST00000414862 IKBKEQ14164 716 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 DTWD1Q8N5C7 304 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 C3orf58Q8NDZ4 430 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 ZFYVE1Q9HBF4 777 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 NMRK2Q9NPI5 230 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 TOGARAM1Q9Y4F4 1720 aa10.72□□□□□ -0.69
TRA2B-204ENST00000414862 FAM229AH3BQW9 127 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 PCDH1Q08174 1060 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 FSTL1Q12841 308 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 SETDB1Q15047 1291 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 RRS1Q15050 365 aaKnown RBP10.71□□□□□ -0.69
TRA2B-204ENST00000414862 ARHGAP27Q6ZUM4 889 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 C10orf71Q711Q0 1435 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 WDR90Q96KV7 1748 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
TRA2B-204ENST00000414862 VTI1BQ9UEU0 232 aa10.71□□□□□ -0.69
TRA2B-204ENST00000414862 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 SOX1O00570 391 aaPredicted RBP10.7□□□□□ -0.7
TRA2B-204ENST00000414862 FSCN2O14926 492 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 DEAF1O75398 565 aaPredicted RBP10.7□□□□□ -0.7
TRA2B-204ENST00000414862 ESRRAP11474 423 aaPredicted RBP10.7□□□□□ -0.7
TRA2B-204ENST00000414862 PRELPP51888 382 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 TGFB2P61812 414 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 PRRT3Q5FWE3 981 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 MAP4K3Q8IVH8 894 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 FMR1NBQ8N0W7 255 aaPredicted RBP10.7□□□□□ -0.7
TRA2B-204ENST00000414862 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 LINC00116Q8NCU8 138 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 SRA1Q9HD15 236 aaKnown RBP10.7□□□□□ -0.7
TRA2B-204ENST00000414862 TAF1LQ8IZX4 1826 aa10.7□□□□□ -0.7
TRA2B-204ENST00000414862 INSRP06213 1382 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 FLT4P35916 1363 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 CYP27B1O15528 508 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 FBLN1P23142 703 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 ZNF423Q2M1K9 1284 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 RPS26P11Q5JNZ5 115 aaPredicted RBP10.69□□□□□ -0.7
TRA2B-204ENST00000414862 SMIM5Q71RC9 77 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 FBXO11Q86XK2 927 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 PIGBQ92521 554 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 WNT8BQ93098 351 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 UBR3Q6ZT12 1888 aa10.69□□□□□ -0.7
TRA2B-204ENST00000414862 COL8A1P27658 744 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 ARL4DP49703 201 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 HTRA3P83110 453 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 MRPL58Q14197 206 aaKnown RBP10.68□□□□□ -0.7
TRA2B-204ENST00000414862 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 HGSNATQ68CP4 663 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 SIN3AQ96ST3 1273 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
TRA2B-204ENST00000414862 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 KIF24Q5T7B8 1368 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 A0A0G2JLW4 131 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 RNF225M0QZC1 329 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-204ENST00000414862 C19orf57Q0VDD7 668 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 KLHL23Q8NBE8 558 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 GALNT11Q8NCW6 608 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 KLHDC7BQ96G42 594 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 OSGEPQ9NPF4 335 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 PPM1HQ9ULR3 514 aa10.67□□□□□ -0.7
TRA2B-204ENST00000414862 UNCXA6NJT0 531 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 B3GALT4O96024 378 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 CTSHP09668 335 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 TMF1P82094 1093 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 FAAP100Q0VG06 881 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 HSP90AB2PQ58FF8 381 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 KCPQ6ZWJ8 1503 aa10.66□□□□□ -0.7
TRA2B-204ENST00000414862 SPATA31C1P0DKV0 1188 aa10.65□□□□□ -0.7
TRA2B-204ENST00000414862 ELNP15502 786 aa10.65□□□□□ -0.7
TRA2B-204ENST00000414862 DPEP1P16444 411 aa10.65□□□□□ -0.7
TRA2B-204ENST00000414862 ZNF157P51786 506 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-204ENST00000414862 ITPK1Q13572 414 aa10.65□□□□□ -0.7
TRA2B-204ENST00000414862 MRRFQ96E11 262 aaKnown RBP10.65□□□□□ -0.7
TRA2B-204ENST00000414862 CRELD1Q96HD1 420 aa10.65□□□□□ -0.7
TRA2B-204ENST00000414862 SOX17Q9H6I2 414 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-204ENST00000414862 RNF181Q9P0P0 153 aa10.65□□□□□ -0.7
TRA2B-204ENST00000414862 GPN3Q9UHW5 284 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-204ENST00000414862 TTF2Q9UNY4 1162 aaKnown RBP10.65□□□□□ -0.7
TRA2B-204ENST00000414862 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
TRA2B-204ENST00000414862 KIF13BQ9NQT8 1826 aa10.64□□□□□ -0.71
TRA2B-204ENST00000414862 DLL1O00548 723 aa10.64□□□□□ -0.71
TRA2B-204ENST00000414862 TM4SF5O14894 197 aa10.64□□□□□ -0.71
TRA2B-204ENST00000414862 CD68P34810 354 aaPredicted RBP10.64□□□□□ -0.71
TRA2B-204ENST00000414862 RBM25P49756 843 aaKnown RBP10.64□□□□□ -0.71
TRA2B-204ENST00000414862 GSTM4Q03013 218 aa10.64□□□□□ -0.71
TRA2B-204ENST00000414862 TPTE2Q6XPS3 522 aa10.64□□□□□ -0.71
TRA2B-204ENST00000414862 ASAP1Q9ULH1 1129 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms