RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 IFNL1Q8IU54 200 aa20.84■□□□□ 0.93
SBDS-202ENST00000414306 TMEM47Q9BQJ4 181 aa20.84■□□□□ 0.93
SBDS-202ENST00000414306 GPHNQ9NQX3 736 aaPredicted RBP20.84■□□□□ 0.93
SBDS-202ENST00000414306 TCP11L1Q9NUJ3 509 aa20.84■□□□□ 0.93
SBDS-202ENST00000414306 IFIT3O14879 490 aaKnown RBP20.83■□□□□ 0.93
SBDS-202ENST00000414306 MCM5P33992 734 aa20.83■□□□□ 0.93
SBDS-202ENST00000414306 USP14P54578 494 aa20.83■□□□□ 0.93
SBDS-202ENST00000414306 SH3D19Q5HYK7 790 aa20.83■□□□□ 0.93
SBDS-202ENST00000414306 GPAT2Q6NUI2 795 aa20.83■□□□□ 0.93
SBDS-202ENST00000414306 FASTKD5Q7L8L6 764 aaKnown RBP20.83■□□□□ 0.93
SBDS-202ENST00000414306 VCPKMTQ9H867 229 aa20.83■□□□□ 0.93
SBDS-202ENST00000414306 SENP2Q9HC62 589 aa20.83■□□□□ 0.93
SBDS-202ENST00000414306 ISY1Q9ULR0 285 aaKnown RBP20.83■□□□□ 0.93
SBDS-202ENST00000414306 TESPA1A2RU30 521 aaPredicted RBP20.83■□□□□ 0.92
SBDS-202ENST00000414306 VCAM1P19320 739 aa20.83■□□□□ 0.92
SBDS-202ENST00000414306 CASTP20810 708 aaKnown RBP20.83■□□□□ 0.92
SBDS-202ENST00000414306 TM4SF4P48230 202 aa20.83■□□□□ 0.92
SBDS-202ENST00000414306 TMEM67Q5HYA8 995 aa20.83■□□□□ 0.92
SBDS-202ENST00000414306 NUP88Q99567 741 aaPredicted RBP20.83■□□□□ 0.92
SBDS-202ENST00000414306 GOPCQ9HD26 462 aa20.83■□□□□ 0.92
SBDS-202ENST00000414306 PDHXO00330 501 aa20.82■□□□□ 0.92
SBDS-202ENST00000414306 NDUFB10O96000 172 aa20.82■□□□□ 0.92
SBDS-202ENST00000414306 INHBEP58166 350 aa20.82■□□□□ 0.92
SBDS-202ENST00000414306 SAMD1Q6SPF0 538 aaPredicted RBP20.82■□□□□ 0.92
SBDS-202ENST00000414306 PROCA1Q8NCQ7 364 aaPredicted RBP20.82■□□□□ 0.92
SBDS-202ENST00000414306 BACH2Q9BYV9 841 aa20.82■□□□□ 0.92
SBDS-202ENST00000414306 AGTPBP1Q9UPW5 1226 aa20.82■□□□□ 0.92
SBDS-202ENST00000414306 ERICH2A1L162 156 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 F5H6K3 240 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 TOP1P11387 765 aaKnown RBP20.81■□□□□ 0.92
SBDS-202ENST00000414306 NT5C2P49902 561 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 KLRC3Q07444 240 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 SART3Q15020 963 aaKnown RBP20.81■□□□□ 0.92
SBDS-202ENST00000414306 SEC23AQ15436 765 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 PPP4R3BQ5MIZ7 849 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 IFIT1BQ5T764 474 aaKnown RBP20.81■□□□□ 0.92
SBDS-202ENST00000414306 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 MKL1Q969V6 931 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 UPF3BQ9BZI7 483 aaKnown RBP20.81■□□□□ 0.92
SBDS-202ENST00000414306 TANGO6Q9C0B7 1094 aa20.81■□□□□ 0.92
SBDS-202ENST00000414306 RPAP3Q9H6T3 665 aaPredicted RBP20.81■□□□□ 0.92
SBDS-202ENST00000414306 TRPA1O75762 1119 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 NOVP48745 357 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 WTAPQ15007 396 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 FAM83BQ5T0W9 1011 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 SLFN13Q68D06 897 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 ANKRD23Q86SG2 305 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 DGKHQ86XP1 1220 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 C12orf42Q96LP6 360 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 KAT14Q9H8E8 782 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 TSKSQ9UJT2 592 aa20.8■□□□□ 0.92
SBDS-202ENST00000414306 PARP14Q460N5 1801 aa20.79■□□□□ 0.92
SBDS-202ENST00000414306 CYP2C8P10632 490 aa20.79■□□□□ 0.92
SBDS-202ENST00000414306 CCDC178Q5BJE1 867 aa20.79■□□□□ 0.92
SBDS-202ENST00000414306 OTUD7BQ6GQQ9 843 aa20.79■□□□□ 0.92
SBDS-202ENST00000414306 DHX32Q7L7V1 743 aaKnown RBP20.79■□□□□ 0.92
SBDS-202ENST00000414306 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
SBDS-202ENST00000414306 TTC14Q96N46 770 aa20.79■□□□□ 0.92
SBDS-202ENST00000414306 UPF2Q9HAU5 1272 aaKnown RBP20.79■□□□□ 0.92
SBDS-202ENST00000414306 PSMA5P28066 241 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 MAP2K1Q02750 393 aaPredicted RBP20.78■□□□□ 0.92
SBDS-202ENST00000414306 TAF1CQ15572 869 aaPredicted RBP20.78■□□□□ 0.92
SBDS-202ENST00000414306 PNMA1Q8ND90 353 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 GMCL1P1Q8NEA9 526 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 IGDCC4Q8TDY8 1250 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 LPAR1Q92633 364 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 LY9Q9HBG7 655 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 RNF186Q9NXI6 227 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 SH2B2O14492 632 aaPredicted RBP20.78■□□□□ 0.92
SBDS-202ENST00000414306 TBC1D8O95759 1140 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 HMGB1P09429 215 aaKnown RBP20.78■□□□□ 0.92
SBDS-202ENST00000414306 RPS6KB1P23443 525 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 FGD1P98174 961 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 EXOSC10Q01780 885 aaKnown RBP20.78■□□□□ 0.92
SBDS-202ENST00000414306 CCDC96Q2M329 555 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 NFXL1Q6ZNB6 911 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 BEGAINQ9BUH8 593 aa20.78■□□□□ 0.92
SBDS-202ENST00000414306 FRMPD2Q68DX3 1309 aaPredicted RBP20.77■□□□□ 0.92
SBDS-202ENST00000414306 WDR46O15213 610 aaKnown RBP20.77■□□□□ 0.92
SBDS-202ENST00000414306 IRX3P78415 501 aaPredicted RBP20.77■□□□□ 0.92
SBDS-202ENST00000414306 CRHR2Q13324 411 aa20.77■□□□□ 0.92
SBDS-202ENST00000414306 KCTD1Q719H9 257 aa20.77■□□□□ 0.92
SBDS-202ENST00000414306 RAB11FIP4Q86YS3 637 aa20.77■□□□□ 0.92
SBDS-202ENST00000414306 JMYQ8N9B5 988 aa20.77■□□□□ 0.92
SBDS-202ENST00000414306 TMEM87BQ96K49 555 aa20.77■□□□□ 0.92
SBDS-202ENST00000414306 ASCC2Q9H1I8 757 aaPredicted RBP20.77■□□□□ 0.92
SBDS-202ENST00000414306 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.92
SBDS-202ENST00000414306 RLFQ13129 1914 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 SLC1A4P43007 532 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 ANAPC15P60006 121 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 PABPC4Q13310 644 aaKnown RBP eCLIP20.76■□□□□ 0.91
SBDS-202ENST00000414306 Q6ZUG5 572 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 RUFY3Q7L099 469 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 ANKS1AQ92625 1134 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 MYL10Q9BUA6 226 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 ZSWIM6Q9HCJ5 1215 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 FBXO28Q9NVF7 368 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 CYP46A1Q9Y6A2 500 aa20.76■□□□□ 0.91
SBDS-202ENST00000414306 COL11A1P12107 1806 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms