RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 PDHXO00330 501 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 TRPA1O75762 1119 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 CASTP20810 708 aaKnown RBP12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 MCM5P33992 734 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 INHBEP58166 350 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 FGD1P98174 961 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 CCDC178Q5BJE1 867 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 IFIT1BQ5T764 474 aaKnown RBP12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 MB21D2Q8IYB1 491 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 NUP88Q99567 741 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 PTPN18Q99952 460 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 TANGO6Q9C0B7 1094 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 KIAA1683Q9H0B3 1180 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 KAT14Q9H8E8 782 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
HLA-DMB-257ENST00000414017 TOP1P11387 765 aaKnown RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 VCAM1P19320 739 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 PSMA5P28066 241 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 TM4SF4P48230 202 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 ANTXR2P58335 489 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 IRX3P78415 501 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 MAP2K1Q02750 393 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 IKQ13123 557 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 COL9A3Q14050 684 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 WTAPQ15007 396 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 TAF1CQ15572 869 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 KIAA1755Q5JYT7 1200 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 BLOC1S2Q6QNY1 142 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 NFXL1Q6ZNB6 911 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 ENAHQ8N8S7 591 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 TMEM47Q9BQJ4 181 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 VCPKMTQ9H867 229 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 NAP1L2Q9ULW6 460 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 AGTPBP1Q9UPW5 1226 aa12.26□□□□□ -0.45
HLA-DMB-257ENST00000414017 GREB1LQ9C091 1923 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 F5H6K3 240 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 TBC1D8O95759 1140 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 NDUFB10O96000 172 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 CYP2C8P10632 490 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 OSBPP22059 807 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 KLRC3Q07444 240 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 PABPC4Q13310 644 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 MOGSQ13724 837 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 FAM83BQ5T0W9 1011 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 RASGRP2Q7LDG7 609 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 ANKRD23Q86SG2 305 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 PROCA1Q8NCQ7 364 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 RNF186Q9NXI6 227 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 PCNTO95613 3336 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 SLC1A4P43007 532 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 NT5C2P49902 561 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 TSGA10IPQ3SY00 556 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 FRMPD2Q68DX3 1309 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 KCTD1Q719H9 257 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 DHX32Q7L7V1 743 aaKnown RBP12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 RAB11FIP4Q86YS3 637 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 PNMA1Q8ND90 353 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 KCNB2Q92953 911 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 MKL1Q969V6 931 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 TTC14Q96N46 770 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 UPF3BQ9BZI7 483 aaKnown RBP12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
HLA-DMB-257ENST00000414017 PTPRFP10586 1907 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 CCDC69A6NI79 296 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 SH2B2O14492 632 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 FLOT1O75955 427 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 HMGB1P09429 215 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms