RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 ACER1Q8TDN7 264 aa12.36□□□□□ -0.43
SMARCAL1-204ENST00000412913 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
SMARCAL1-204ENST00000412913 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
SMARCAL1-204ENST00000412913 NCOA5Q9HCD5 579 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-204ENST00000412913 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
SMARCAL1-204ENST00000412913 SYNPO2Q9UMS6 1093 aa12.36□□□□□ -0.43
SMARCAL1-204ENST00000412913 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 CTDNEP1O95476 244 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 PDHBP11177 359 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 METAP2P50579 478 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 NTRK3Q16288 839 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 SLC35G1Q2M3R5 365 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 TMX2Q9Y320 296 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
SMARCAL1-204ENST00000412913 USP17L5A8MUK1 530 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 DTNBO60941 627 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 YY1P25490 414 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 FUT2Q10981 343 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 LDLRAD1Q5T700 205 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 CST9Q5W186 159 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 CLMNQ96JQ2 1002 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 ARHGEF10LQ9HCE6 1279 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 MAD2L2Q9UI95 211 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 MYH15Q9Y2K3 1946 aa12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 COL11A1P12107 1806 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-204ENST00000412913 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 CELF2O95319 508 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 PLEKHA8P1O95397 391 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 NDUFB10O96000 172 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 CALM1P0DP23 149 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 CALM2P0DP24 149 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 CALM3P0DP25 149 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 ADD1P35611 737 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 FKBP1BP68106 108 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 ATP2B2Q01814 1243 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 DGKZQ13574 1117 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 RTN1Q16799 776 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 STAG2Q8N3U4 1231 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 INTS4Q96HW7 963 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 GBA2Q9HCG7 927 aaPredicted RBP12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
SMARCAL1-204ENST00000412913 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 JAK2O60674 1132 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 DDIT3P35638 169 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 GJA5P36382 358 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 NBPF11Q86T75 865 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 FANCBQ8NB91 859 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 PICK1Q9NRD5 415 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 CSADQ9Y600 493 aa12.32□□□□□ -0.44
SMARCAL1-204ENST00000412913 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 F5H6K3 240 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 IFNAR1P17181 557 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 KLRC3Q07444 240 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 MTMR2Q13614 643 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 TTLL12Q14166 644 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 ZYXQ15942 572 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 USP17L2Q6R6M4 530 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 ZNF280CQ8ND82 737 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 DCAF4Q8WV16 495 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms