RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 MKRN3Q13064 507 aaKnown RBP19.52■□□□□ 0.72
SUMO1-208ENST00000409627 NOGQ13253 232 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 WTAPQ15007 396 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 IFIT1BQ5T764 474 aaKnown RBP19.52■□□□□ 0.72
SUMO1-208ENST00000409627 USP17L2Q6R6M4 530 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 MS4A4AQ96JQ5 239 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 C12orf42Q96LP6 360 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 KIF2CQ99661 725 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 TMEM47Q9BQJ4 181 aa19.52■□□□□ 0.72
SUMO1-208ENST00000409627 MANSC4A6NHS7 340 aaPredicted RBP19.51■□□□□ 0.71
SUMO1-208ENST00000409627 CETPP11597 493 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 LIFRP42702 1097 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 HMGCS2P54868 508 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 LRRC47Q8N1G4 583 aaKnown RBP19.51■□□□□ 0.71
SUMO1-208ENST00000409627 FBXL16Q8N461 479 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 PROCA1Q8NCQ7 364 aaPredicted RBP19.51■□□□□ 0.71
SUMO1-208ENST00000409627 GMCL1P1Q8NEA9 526 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 TCEANC2Q96MN5 208 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 UPF3BQ9BZI7 483 aaKnown RBP19.51■□□□□ 0.71
SUMO1-208ENST00000409627 VCPKMTQ9H867 229 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 GOPCQ9HD26 462 aa19.51■□□□□ 0.71
SUMO1-208ENST00000409627 WDR33Q9C0J8 1336 aaKnown RBP19.51■□□□□ 0.71
SUMO1-208ENST00000409627 TESPA1A2RU30 521 aaPredicted RBP19.5■□□□□ 0.71
SUMO1-208ENST00000409627 GRM1Q13255 1194 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 FASTKD5Q7L8L6 764 aaKnown RBP19.5■□□□□ 0.71
SUMO1-208ENST00000409627 TMTC2Q8N394 836 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 LPAR1Q92633 364 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 LRRC2Q9BYS8 371 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 AGXT2Q9BYV1 514 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 EMILIN3Q9NT22 766 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 TMOD4Q9NZQ9 345 aa19.5■□□□□ 0.71
SUMO1-208ENST00000409627 CCL15-CCL14A0A0B4J2E2 113 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 F5H6K3 240 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 VEGFBP49765 207 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 KLRC3Q07444 240 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 MOGSQ13724 837 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
SUMO1-208ENST00000409627 CCL15Q16663 113 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 SGMS1Q86VZ5 419 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 PNMA1Q8ND90 353 aa19.49■□□□□ 0.71
SUMO1-208ENST00000409627 PARP14Q460N5 1801 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 INHBEP58166 350 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 SREBF2Q12772 1141 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 DGKZQ13574 1117 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 Q6ZUG5 572 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 REM2Q8IYK8 340 aaPredicted RBP19.48■□□□□ 0.71
SUMO1-208ENST00000409627 BRI3BPQ8WY22 251 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 ALDH8A1Q9H2A2 487 aaPredicted RBP19.48■□□□□ 0.71
SUMO1-208ENST00000409627 SENP2Q9HC62 589 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 GPHNQ9NQX3 736 aaPredicted RBP19.48■□□□□ 0.71
SUMO1-208ENST00000409627 PDRG1Q9NUG6 133 aa19.48■□□□□ 0.71
SUMO1-208ENST00000409627 WDR46O15213 610 aaKnown RBP19.47■□□□□ 0.71
SUMO1-208ENST00000409627 AOC2O75106 756 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 NDUFB10O96000 172 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 VCAM1P19320 739 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 MAP2K2P36507 400 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 FGD1P98174 961 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 KIF23Q02241 960 aaPredicted RBP19.47■□□□□ 0.71
SUMO1-208ENST00000409627 RABEP1Q15276 862 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 KIAA1755Q5JYT7 1200 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 SLFN13Q68D06 897 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 GADL1Q6ZQY3 521 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 IL27Q8NEV9 243 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 GMCL1Q96IK5 515 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 AGTPBP1Q9UPW5 1226 aa19.47■□□□□ 0.71
SUMO1-208ENST00000409627 CCDC69A6NI79 296 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 SNHG28P0DPA3 235 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 TM4SF4P48230 202 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 NFXL1Q6ZNB6 911 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 ANKRD23Q86SG2 305 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 DCAF4Q8WV16 495 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 ZIC5Q96T25 663 aa19.46■□□□□ 0.71
SUMO1-208ENST00000409627 RAD21O60216 631 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 PDHBP11177 359 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 NEK4P51957 841 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 TOB2Q14106 344 aaPredicted RBP19.45■□□□□ 0.7
SUMO1-208ENST00000409627 TREML2Q5T2D2 321 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 GPAT2Q6NUI2 795 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 CATIPQ7Z7H3 387 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 ZNF654Q8IZM8 581 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 SPICE1Q8N0Z3 855 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 BRF1Q92994 677 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
SUMO1-208ENST00000409627 SLC45A1Q9Y2W3 748 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 RLFQ13129 1914 aa19.45■□□□□ 0.7
SUMO1-208ENST00000409627 BTBD19C9JJ37 291 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 DDAH1O94760 285 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 HOXA7P31268 230 aaPredicted RBP19.44■□□□□ 0.7
SUMO1-208ENST00000409627 SLC1A4P43007 532 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 EVCP57679 992 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 TROAPQ12815 778 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 PABPC4Q13310 644 aaKnown RBP eCLIP19.44■□□□□ 0.7
SUMO1-208ENST00000409627 ANKRD1Q15327 319 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 PTPN18Q99952 460 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 RPAP3Q9H6T3 665 aaPredicted RBP19.44■□□□□ 0.7
SUMO1-208ENST00000409627 SLC12A7Q9Y666 1083 aa19.44■□□□□ 0.7
SUMO1-208ENST00000409627 BMP3P12645 472 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms