RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 RAD9BQ6WBX8 426 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ESR2Q92731 530 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 THRAP3Q9Y2W1 955 aaKnown RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 TM4SF1P30408 202 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 KRT2P35908 639 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 DDB1Q16531 1140 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 DHX58Q96C10 678 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ZHX1Q9UKY1 873 aaPredicted RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ORC4O43929 436 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 COBLO75128 1261 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ABL1P00519 1130 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ERCC5P28715 1186 aaPredicted RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 SART3Q15020 963 aaKnown RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 SLC10A5Q5PT55 438 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 IL17RBQ9NRM6 502 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 UBR3Q6ZT12 1888 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ZNF646O15015 1829 aaPredicted RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 CCDC196A0A1B0GTZ2 297 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 SOWAHDA6NJG2 315 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 STX10O60499 249 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 UBAC1Q9BSL1 405 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 DESI2Q9BSY9 194 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 MRFAP1Q9Y605 127 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 PRDX5P30044 214 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 CLEC4GQ6UXB4 293 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 USP17L21D6R901 530 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 DDAH1O94760 285 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 PPP2R5BQ15173 497 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 SAFBQ15424 915 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSH2-202ENST00000406134 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 CDC5LQ99459 802 aaKnown RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
MSH2-202ENST00000406134 ROBO3Q96MS0 1386 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 SNED1Q8TER0 1413 aa11.23□□□□□ -0.61
MSH2-202ENST00000406134 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 ZBTB22O15209 634 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 GYPCP04921 128 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
MSH2-202ENST00000406134 FAM47AQ5JRC9 791 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 QSER1Q2KHR3 1735 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 ERICH2A1L162 156 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 SASH3O75995 380 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 TUBB4AP04350 444 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 AFMP43652 599 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 RBL2Q08999 1139 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 PTGDRQ13258 359 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 ZNF174Q15697 407 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 GRIK5Q16478 980 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
MSH2-202ENST00000406134 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 NPHP1O15259 732 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 SPATA1Q5VX52 437 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 STAMQ92783 540 aa11.22□□□□□ -0.61
MSH2-202ENST00000406134 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSH2-202ENST00000406134 PFKFB3Q16875 520 aaPredicted RBP11.21□□□□□ -0.61
MSH2-202ENST00000406134 BARGINQ6ZT62 677 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 RBM28Q9NW13 759 aaKnown RBP11.21□□□□□ -0.61
MSH2-202ENST00000406134 MYH7BA7E2Y1 1941 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 STX17P56962 302 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 ARHGAP29Q52LW3 1261 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 TTC38Q5R3I4 469 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 PANX2Q96RD6 677 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
MSH2-202ENST00000406134 CARD6Q9BX69 1037 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.61
MSH2-202ENST00000406134 CNTNAP4Q9C0A0 1308 aa11.21□□□□□ -0.62
MSH2-202ENST00000406134 ERVK-24P63145 666 aa11.21□□□□□ -0.62
MSH2-202ENST00000406134 TERF2Q15554 542 aa11.21□□□□□ -0.62
MSH2-202ENST00000406134 SBK1Q52WX2 424 aa11.21□□□□□ -0.62
MSH2-202ENST00000406134 FERMT2Q96AC1 680 aa11.21□□□□□ -0.62
MSH2-202ENST00000406134 LRRC10BA6NIK2 292 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 CYTH3O43739 400 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 TFRCP02786 760 aaKnown RBP11.2□□□□□ -0.62
MSH2-202ENST00000406134 PNMA6AP0CW24 399 aaPredicted RBP11.2□□□□□ -0.62
MSH2-202ENST00000406134 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms