RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CATIPQ7Z7H3 387 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 ANKRD13CQ8N6S4 541 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 CNNM2Q9H8M5 875 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 LTN1O94822 1766 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 PP2D1A8MPX8 630 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 ERCC5P28715 1186 aaPredicted RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 COPB1P53618 953 aaKnown RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 SRLQ86TD4 932 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 TTF2Q9UNY4 1162 aaKnown RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 LUC7L2Q9Y383 392 aaKnown RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 EPN1Q9Y6I3 576 aaPredicted RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 TULP2O00295 520 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 ATP1A1P05023 1023 aaKnown RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 STAT6P42226 847 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 DYNLL1P63167 89 aaKnown RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 PAK1Q13153 545 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 TMTC1Q8IUR5 882 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 UIMC1Q96RL1 719 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 MMS19Q96T76 1030 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 GBP3Q9H0R5 595 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 TSPYL1Q9H0U9 437 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 DUSP10Q9Y6W6 482 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 PCCAP05165 728 aaPredicted RBP10.33□□□□□ -0.76
HPS4-203ENST00000402105 SLC7A5Q01650 507 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 PPARAQ07869 468 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 C2orf54Q08AI8 447 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 IQUBQ8NA54 791 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 SMCR8Q8TEV9 937 aaPredicted RBP10.33□□□□□ -0.76
HPS4-203ENST00000402105 CENPHQ9H3R5 247 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 L1RE1Q9UN81 338 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 CRYBG1Q9Y4K1 1723 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
HPS4-203ENST00000402105 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 UQCRFS1P1P0C7P4 283 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 IDEP14735 1019 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 LIFRP42702 1097 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 ESR2Q92731 530 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 GPKOWQ92917 476 aaPredicted RBP eCLIP10.33□□□□□ -0.76
HPS4-203ENST00000402105 ISCA1Q9BUE6 129 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.76
HPS4-203ENST00000402105 SMARCAL1Q9NZC9 954 aa10.33□□□□□ -0.76
HPS4-203ENST00000402105 TTC26A0AVF1 554 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 B4DLN1 442 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 VEGFAP15692 232 aaPredicted RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 GYG1P46976 350 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 SARSP49591 514 aaKnown RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 KLK7P49862 253 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 EVX2Q03828 476 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 PUM3Q15397 648 aaKnown RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 E2F4Q16254 413 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 CCDC96Q2M329 555 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 SGMS1Q86VZ5 419 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 NLRP10Q86W26 655 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 AFAP1L1Q8TED9 768 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.32□□□□□ -0.76
HPS4-203ENST00000402105 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 PPP1R3GB7ZBB8 358 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 GTF2A1P52655 376 aaPredicted RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 CCDC178Q5BJE1 867 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 FBXL16Q8N461 479 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 GPATCH11Q8N954 259 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 TRIML1Q8N9V2 468 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 SAR1BQ9Y6B6 198 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 NFAT5O94916 1531 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 NDUFA10O95299 355 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 IVLP07476 585 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 MTIF2P46199 727 aaKnown RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 STIM1Q13586 685 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 TTC31Q49AM3 519 aaPredicted RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 RASGRP2Q7LDG7 609 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 IQCA1Q86XH1 822 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 CTCFLQ8NI51 663 aaPredicted RBP10.32□□□□□ -0.76
HPS4-203ENST00000402105 LPIN2Q92539 896 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 EHD4Q9H223 541 aa10.32□□□□□ -0.76
HPS4-203ENST00000402105 EIF3CLB5ME19 914 aaKnown RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 MYO1BO43795 1136 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 PRCPP42785 496 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 CCT5P48643 541 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 LIG3P49916 1009 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 PTPROQ16827 1216 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 SND1Q7KZF4 910 aaKnown RBP eCLIP10.31□□□□□ -0.76
HPS4-203ENST00000402105 JAKMIP2Q96AA8 810 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 EIF3CQ99613 913 aaKnown RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 NAA15Q9BXJ9 866 aaKnown RBP10.31□□□□□ -0.76
HPS4-203ENST00000402105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.765e-7■□□□□ 11.2
HPS4-203ENST00000402105 ZBTB1Q9Y2K1 713 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 KDM3BQ7LBC6 1761 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 MAP2K7O14733 419 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 ZEB2O60315 1214 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 GGCXP38435 758 aa10.31□□□□□ -0.76
HPS4-203ENST00000402105 ATP2B2Q01814 1243 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms