RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CCDC47Q96A33 483 aaKnown RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 TAB2Q9NYJ8 693 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 MAGEC2Q9UBF1 373 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 ZNF804BA4D1E1 1349 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 ERICH4A6NGS2 130 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 C6orf229H3BNL8 230 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 BMP6P22004 513 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 PLCD1P51178 756 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 KRT222Q8N1A0 295 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 SRBD1Q8N5C6 995 aaKnown RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 PNMA1Q8ND90 353 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 ENOX1Q8TC92 643 aaKnown RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 FERMT2Q96AC1 680 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 PAGE5Q96GU1 130 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 ANKRD2Q9GZV1 360 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 DCP1AQ9NPI6 582 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 PUF60Q9UHX1 559 aaKnown RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 PARP4Q9UKK3 1724 aaKnown RBP8.7□□□□□ -1.02
HDAC9-201ENST00000401921 KIF5CO60282 957 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 CCDC175P0C221 793 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 SLFN14P0C7P3 912 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 DTHD1Q6ZMT9 781 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 RPGRQ92834 1020 aaKnown RBP8.7□□□□□ -1.02
HDAC9-201ENST00000401921 ADAMTS7Q9UKP4 1686 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 CALML3P27482 149 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 STIM1Q13586 685 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 INF2Q27J81 1249 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 LETM2Q2VYF4 491 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 ZNF569Q5MCW4 686 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 SLC44A5Q8NCS7 719 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 NSUN4Q96CB9 384 aaKnown RBP8.7□□□□□ -1.02
HDAC9-201ENST00000401921 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 RIOK1Q9BRS2 568 aaKnown RBP8.7□□□□□ -1.02
HDAC9-201ENST00000401921 EPC1Q9H2F5 836 aa8.7□□□□□ -1.02
HDAC9-201ENST00000401921 SPATA31A1Q5TZJ5 1347 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 SOWAHDA6NJG2 315 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 IPO7O95373 1038 aaKnown RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 NAPAP54920 295 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 UBXN1Q04323 297 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 SLC20A2Q08357 652 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 MTF1Q14872 753 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 SEC23AQ15436 765 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 SPATA1Q5VX52 437 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 CLEC4GQ6UXB4 293 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 TOGARAM2Q6ZUX3 1019 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 TMTC3Q6ZXV5 915 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 TXNRD3Q86VQ6 643 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 BLIDQ8IZY5 108 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 TRIML1Q8N9V2 468 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 CTAGE1Q96RT6 745 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 GOLGA6L9A6NEM1 432 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 VEGFAP15692 232 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 EIF6P56537 245 aaKnown RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 RBL2Q08999 1139 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 PICALMQ13492 652 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 MORC3Q14149 939 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 BMS1Q14692 1282 aaKnown RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 CCDC178Q5BJE1 867 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 LRRN4CLQ8ND94 238 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 CDK5RAP3Q96JB5 506 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 UIMC1Q96RL1 719 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 ATP8A2Q9NTI2 1148 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 RNF216Q9NWF9 866 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 PKD1L3Q7Z443 1732 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 ACTN4O43707 911 aaKnown RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 DDAH1O94760 285 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 SSBP05455 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 LDHCP07864 332 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 ERCC3P19447 782 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 CASP14P31944 242 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 GABPB1Q06547 395 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 TROAPQ12815 778 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 PKN1Q16512 942 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 MEX3CQ5U5Q3 659 aaKnown RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 PHF20Q9BVI0 1012 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 TCP11L1Q9NUJ3 509 aa8.69□□□□□ -1.02
HDAC9-201ENST00000401921 ARPP21Q9UBL0 812 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 SEC63Q9UGP8 760 aaKnown RBP8.69□□□□□ -1.02
HDAC9-201ENST00000401921 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 STX10O60499 249 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 PAK1Q13153 545 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 CUL4BQ13620 913 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 ZNF579Q8NAF0 562 aaKnown RBP8.68□□□□□ -1.02
HDAC9-201ENST00000401921 NELFBQ8WX92 580 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 TSPYL1Q9H0U9 437 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 A0A087X0B3 334 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms