RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 NCAPH2Q6IBW4 605 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TPH2Q8IWU9 490 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TRMT2AQ8IZ69 625 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 IFNL3Q8IZI9 196 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 REXO1Q8N1G1 1221 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 MYCT1Q8N699 235 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TIGD1Q96MW7 591 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 BIN2Q9UBW5 565 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 NRKQ7Z2Y5 1582 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ADCY9O60503 1353 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 LOC102724428A0A0B4J2F2 783 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 M0R2C6 588 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ZNF75DP51815 510 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 VAV2P52735 878 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SIK1P57059 783 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 LRMPQ12912 555 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 PTPROQ16827 1216 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SLFNL1Q499Z3 407 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 KIAA0825Q8IV33 1275 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SIRT2Q8IXJ6 389 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ANKS4BQ8N8V4 417 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 DSCC1Q9BVC3 393 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 CARD6Q9BX69 1037 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ZMYND15Q9H091 742 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 CCDC87Q9NVE4 849 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 RSPH14Q9UHP6 348 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 DNM3Q9UQ16 869 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ATP6V0A2Q9Y487 856 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 NOP56O00567 594 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 SORBS3O60504 671 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 HPDP32754 393 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 PLCD1P51178 756 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 UTP14CQ5TAP6 766 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 PROCA1Q8NCQ7 364 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 PUS3Q9BZE2 481 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 XPO4Q9C0E2 1151 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 RABEP2Q9H5N1 569 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 RASAL2Q9UJF2 1139 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 DBNLQ9UJU6 430 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 SCN3AQ9NY46 2000 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 CEP290O15078 2479 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ROBO2Q9HCK4 1378 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 PLEKHG3A1L390 1219 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ARHGEF35A5YM69 484 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 APBA3O96018 575 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 PDE6AP16499 860 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 RPL13P26373 211 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 CYP26C1Q6V0L0 522 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 C2CD5Q86YS7 1000 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 CCDC63Q8NA47 563 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 USP28Q96RU2 1077 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 HINFPQ9BQA5 517 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SELENOSQ9BQE4 189 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 UTP11Q9Y3A2 253 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 PCDHB13Q9Y5F0 798 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 CARMIL3Q8ND23 1372 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 PLA2R1Q13018 1463 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SMCO2A6NFE2 343 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TRIM37O94972 964 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 PDE8BO95263 885 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 MNAT1P51948 309 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SMTNP53814 917 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ELF2Q15723 593 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 OTUD6BQ8N6M0 293 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ZNF274Q96GC6 653 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 TRIM6Q9C030 488 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 KCNK9Q9NPC2 374 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 IMPACTQ9P2X3 320 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 MED23Q9ULK4 1368 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 BTBD18B2RXH4 712 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 HGSO14964 777 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 BIRC3Q13489 604 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 UAP1Q16222 522 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 TBC1D10BQ4KMP7 808 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 ADALQ6DHV7 355 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TYW1BQ6NUM6 668 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 LARGE2Q8N3Y3 721 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 SNX29Q8TEQ0 813 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TSC1Q92574 1164 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 TEKT1Q969V4 418 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 MRRFQ96E11 262 aaKnown RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 FAM207AQ9NSI2 230 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 MAP3K15Q6ZN16 1313 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 WDR81Q562E7 1941 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 PCNTO95613 3336 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 ZMYM6O95789 1325 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.62□□□□□ -1.83
KNL1-202ENST00000399668 SPECC1LQ69YQ0 1117 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 KRT40Q6A162 431 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 HDXQ7Z353 690 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 CPLX4Q7Z7G2 160 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 LRRC8AQ8IWT6 810 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 PNMA1Q8ND90 353 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 GIMAP7Q8NHV1 300 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 GPKOWQ92917 476 aaPredicted RBP eCLIP3.62□□□□□ -1.834e-6■■■□□ 16.3
KNL1-202ENST00000399668 NLRC4Q9NPP4 1024 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 PPANQ9NQ55 473 aaKnown RBP3.62□□□□□ -1.83
KNL1-202ENST00000399668 TAB2Q9NYJ8 693 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 TXNDC16Q9P2K2 825 aa3.62□□□□□ -1.83
KNL1-202ENST00000399668 ARID1AO14497 2285 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms