RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 USP19O94966 1318 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 ATP1A2P50993 1020 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 CYP4A11Q02928 519 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 HERC4Q5GLZ8 1057 aaPredicted RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 TNFAIP3P21580 790 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 MUM1Q2TAK8 710 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 MKRN1Q9UHC7 482 aaKnown RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 PPME1Q9Y570 386 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 TRAPPC8Q9Y2L5 1435 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 RNF10Q8N5U6 811 aaKnown RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 NUF2Q9BZD4 464 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 SPC25Q9HBM1 224 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 FLT4P35916 1363 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 USP17L21D6R901 530 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 GAS8O95995 478 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 GNL1P36915 607 aaPredicted RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 VPS41P49754 854 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 PPP2R5AQ15172 486 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 SH2D4BQ5SQS7 431 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 KLHL7Q8IXQ5 586 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 METTL22Q9BUU2 404 aaPredicted RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 SH2D4AQ9H788 454 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 AKT3Q9Y243 479 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 JAK2O60674 1132 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 MX2P20592 715 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 ANKRD44Q8N8A2 993 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 MRFAP1L1Q96HT8 127 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 MYCBPQ99417 103 aaPredicted RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 RIOK1Q9BRS2 568 aaKnown RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 FAM204AQ9H8W3 233 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 NKIRAS1Q9NYS0 192 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 UHRF1BP1Q6BDS2 1440 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 VAMP4O75379 141 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 KRT83P78385 493 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 VSIG1Q86XK7 387 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 ERO1AQ96HE7 468 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 CETN3O15182 167 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 KAZNQ674X7 775 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 RNF168Q8IYW5 571 aaPredicted RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 TEKT1Q969V4 418 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 RMDN2Q96LZ7 410 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 A2MP01023 1474 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 SLC27A2O14975 620 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 BMP2KLQ5H9B9 411 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 MYRIPQ8NFW9 859 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
ATL3-201ENST00000398868 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
ATL3-201ENST00000398868 BICDL2A1A5D9 508 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 PFDN1O60925 122 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 ABCB4P21439 1286 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 DNM2P50570 870 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
ATL3-201ENST00000398868 TSNAXIP1Q2TAA8 658 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 DCUN1D2Q6PH85 259 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 PRKAG2Q9UGJ0 569 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 C21orf2O43822 256 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 SMIM24O75264 130 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 CAPN15O75808 1086 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 ATICP31939 592 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 GUCY2FP51841 1108 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 WHAMMP3Q1A5X7 153 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 C8orf34Q49A92 452 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 AP1ARQ63HQ0 302 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 POTEDQ86YR6 584 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 ANKRD42Q8N9B4 389 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 PALD1Q9ULE6 856 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 MRFAP1Q9Y605 127 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 EYA2O00167 538 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
ATL3-201ENST00000398868 CCDC38Q502W7 563 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 EXOC3O60645 756 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 E2F5Q15329 346 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 E2F4Q16254 413 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 CABS1Q96KC9 395 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 NLRC4Q9NPP4 1024 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 ANKRD36BQ8N2N9 1353 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 LRRIQ4A6NIV6 560 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 ADCY7P51828 1080 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 NLRX1Q86UT6 975 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 PARD3BQ8TEW8 1205 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 MRPL46Q9H2W6 279 aaKnown RBP10.34□□□□□ -0.75
ATL3-201ENST00000398868 SEC31BQ9NQW1 1179 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 BTDP43251 543 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 CUL4BQ13620 913 aa10.34□□□□□ -0.75
ATL3-201ENST00000398868 CCDC127Q96BQ5 260 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 ALDH1L1O75891 902 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 CLTAP09496 248 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 CTSWP56202 376 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 CHMP6Q96FZ7 201 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 PLVAPQ9BX97 442 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 AKR1B15C9JRZ8 316 aaPredicted RBP10.33□□□□□ -0.76
ATL3-201ENST00000398868 ATP2A1O14983 1001 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 GAS7O60861 476 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 SETSIPP0DME0 302 aa10.33□□□□□ -0.76
ATL3-201ENST00000398868 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms