RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 RASEFQ8IZ41 740 aa29.91■■■□□ 2.38
TMEM55B-202ENST00000398020 NCOA7Q8NI08 942 aa29.91■■■□□ 2.38
TMEM55B-202ENST00000398020 CHMP4CQ96CF2 233 aa29.91■■■□□ 2.38
TMEM55B-202ENST00000398020 ZCCHC17Q9NP64 241 aaKnown RBP29.91■■■□□ 2.38
TMEM55B-202ENST00000398020 TCP11L1Q9NUJ3 509 aa29.91■■■□□ 2.38
TMEM55B-202ENST00000398020 COL9A3Q14050 684 aaPredicted RBP29.9■■■□□ 2.38
TMEM55B-202ENST00000398020 MKL1Q969V6 931 aa29.9■■■□□ 2.38
TMEM55B-202ENST00000398020 GOPCQ9HD26 462 aa29.9■■■□□ 2.38
TMEM55B-202ENST00000398020 CHST3Q7LGC8 479 aa29.89■■■□□ 2.38
TMEM55B-202ENST00000398020 IQCA1Q86XH1 822 aa29.89■■■□□ 2.38
TMEM55B-202ENST00000398020 SEC24BO95487 1268 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 HSPA4P34932 840 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 USP26Q9BXU7 913 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 RPAP3Q9H6T3 665 aaPredicted RBP29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 ZFYVE28Q9HCC9 887 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 SLC45A1Q9Y2W3 748 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 F5H6K3 240 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 KLRC3Q07444 240 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 C8orf34Q49A92 452 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 RCSD1Q6JBY9 416 aa29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 ZSCAN10Q96SZ4 725 aaPredicted RBP29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 ASCC2Q9H1I8 757 aaPredicted RBP29.88■■■□□ 2.37
TMEM55B-202ENST00000398020 TNKSO95271 1327 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 ZKSCAN1P17029 563 aaPredicted RBP29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 NOVP48745 357 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 NT5C2P49902 561 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 PABPC4Q13310 644 aaKnown RBP eCLIP29.87■■■□□ 2.376e-14■■■■□ 22.8
TMEM55B-202ENST00000398020 PPP4R3BQ5MIZ7 849 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 LPAR1Q92633 364 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 PARK7Q99497 189 aaKnown RBP29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 NUP88Q99567 741 aaPredicted RBP29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 UBAC1Q9BSL1 405 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 MTMR7Q9Y216 660 aa29.87■■■□□ 2.37
TMEM55B-202ENST00000398020 NDUFB10O96000 172 aa29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 HSPA8P11142 646 aaKnown RBP29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 HOXA7P31268 230 aaPredicted RBP29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 IRX3P78415 501 aaPredicted RBP29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 MB21D2Q8IYB1 491 aaPredicted RBP29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 TMEM47Q9BQJ4 181 aa29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 CFHR5Q9BXR6 569 aa29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 TANGO6Q9C0B7 1094 aa29.86■■■□□ 2.37
TMEM55B-202ENST00000398020 OSBPP22059 807 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 ADCK5Q3MIX3 580 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 ENAHQ8N8S7 591 aaPredicted RBP29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 PNMA3Q9UL41 463 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L15C9J2P7 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L13C9JLJ4 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L11C9JVI0 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L18D6R9N7 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L22D6RA61 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L17D6RBQ6 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L19D6RCP7 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L20D6RJB6 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 LBX1P52954 281 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 USP17L24Q0WX57 530 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 FAM83BQ5T0W9 1011 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 RASGRP2Q7LDG7 609 aa29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 SMCR8Q8TEV9 937 aaPredicted RBP29.85■■■□□ 2.37
TMEM55B-202ENST00000398020 TLR2O60603 784 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 CTCFP49711 727 aaPredicted RBP29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 ANTXR2P58335 489 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 CATSPERGQ6ZRH7 1159 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 GMCL1P1Q8NEA9 526 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 TTC14Q96N46 770 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 P2RX7Q99572 595 aaKnown RBP29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 CPA4Q9UI42 421 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 SNX14Q9Y5W7 946 aa29.84■■■□□ 2.37
TMEM55B-202ENST00000398020 WDR46O15213 610 aaKnown RBP29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 TOP1P11387 765 aaKnown RBP29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 TSGA10IPQ3SY00 556 aa29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 SLFN13Q68D06 897 aa29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 DGKHQ86XP1 1220 aa29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 KCNB2Q92953 911 aa29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 SYNPO2Q9UMS6 1093 aa29.83■■■□□ 2.37
TMEM55B-202ENST00000398020 SAMD1Q6SPF0 538 aaPredicted RBP29.82■■■□□ 2.36
TMEM55B-202ENST00000398020 IFIT3O14879 490 aaKnown RBP29.82■■■□□ 2.36
TMEM55B-202ENST00000398020 EPB41L2O43491 1005 aaKnown RBP29.82■■■□□ 2.36
TMEM55B-202ENST00000398020 CCDC178Q5BJE1 867 aa29.82■■■□□ 2.36
TMEM55B-202ENST00000398020 NEK1Q96PY6 1258 aa29.82■■■□□ 2.36
TMEM55B-202ENST00000398020 ADGRA2Q96PE1 1338 aa29.81■■■□□ 2.36
TMEM55B-202ENST00000398020 GPR25O00155 361 aa29.81■■■□□ 2.36
TMEM55B-202ENST00000398020 PRC1O43663 620 aa29.81■■■□□ 2.36
TMEM55B-202ENST00000398020 MCCP23508 829 aa29.81■■■□□ 2.36
TMEM55B-202ENST00000398020 ISY1Q9ULR0 285 aaKnown RBP29.81■■■□□ 2.36
TMEM55B-202ENST00000398020 HERVK_113P62684 666 aa29.8■■■□□ 2.36
TMEM55B-202ENST00000398020 KRT32Q14532 448 aa29.8■■■□□ 2.36
TMEM55B-202ENST00000398020 SEC23AQ15436 765 aa29.8■■■□□ 2.36
TMEM55B-202ENST00000398020 FBXO28Q9NVF7 368 aa29.8■■■□□ 2.36
TMEM55B-202ENST00000398020 PEX10O60683 326 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 FLOT1O75955 427 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 MCM5P33992 734 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 IFIT1BQ5T764 474 aaKnown RBP29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 KAT14Q9H8E8 782 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 SENP2Q9HC62 589 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 GPHNQ9NQX3 736 aaPredicted RBP29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 C17orf99Q6UX52 265 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 ZNF296Q8WUU4 475 aaPredicted RBP29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 JAKMIP1Q96N16 626 aaKnown RBP29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 LRRC2Q9BYS8 371 aa29.79■■■□□ 2.36
TMEM55B-202ENST00000398020 ERICH2A1L162 156 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms