RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 NUCKS1Q9H1E3 243 aaKnown RBP12.93□□□□□ -0.34
PUM3-202ENST00000397885 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
PUM3-202ENST00000397885 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
PUM3-202ENST00000397885 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 MYBL2P10244 700 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 ATP5JP18859 108 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 PRPHP41219 470 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 CDCA2Q69YH5 1023 aaPredicted RBP12.93□□□□□ -0.34
PUM3-202ENST00000397885 CYB5D1Q6P9G0 228 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 TMTC1Q8IUR5 882 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 AENQ8WTP8 325 aaKnown RBP12.93□□□□□ -0.34
PUM3-202ENST00000397885 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 CLIC4Q9Y696 253 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 TAF6LQ9Y6J9 622 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 ANKRD18BA2A2Z9 1011 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 SNUPNO95149 360 aaKnown RBP12.92□□□□□ -0.34
PUM3-202ENST00000397885 NEFHP12036 1026 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 PDCD2Q16342 344 aaPredicted RBP12.92□□□□□ -0.34
PUM3-202ENST00000397885 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 CNGA4Q8IV77 575 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 MLKLQ8NB16 471 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 EHD4Q9H223 541 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 RFX7Q2KHR2 1363 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 CARMIL3Q8ND23 1372 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 C5P01031 1676 aa12.92□□□□□ -0.34
PUM3-202ENST00000397885 PSMD14O00487 310 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
PUM3-202ENST00000397885 PTGER2P43116 358 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 NAA35Q5VZE5 725 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 CCDC70Q6NSX1 233 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 C6orf89Q6UWU4 347 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 AACSQ86V21 672 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 FUKQ8N0W3 1084 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 PIGBQ92521 554 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 ZNF274Q96GC6 653 aaPredicted RBP12.91□□□□□ -0.34
PUM3-202ENST00000397885 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 PPP6R2O75170 966 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
PUM3-202ENST00000397885 KCNQ4P56696 695 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 APBA1Q02410 837 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
PUM3-202ENST00000397885 MYSM1Q5VVJ2 828 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 KDM7AQ6ZMT4 941 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
PUM3-202ENST00000397885 P3H4Q92791 437 aa12.91□□□□□ -0.34
PUM3-202ENST00000397885 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
PUM3-202ENST00000397885 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 PAPD7Q5XG87 772 aaKnown RBP12.9□□□□□ -0.34
PUM3-202ENST00000397885 ANO1Q5XXA6 986 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 NCAPH2Q6IBW4 605 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 C1orf131Q8NDD1 294 aaKnown RBP12.9□□□□□ -0.34
PUM3-202ENST00000397885 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
PUM3-202ENST00000397885 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 NFE2L3Q9Y4A8 694 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 PNPLA7Q6ZV29 1317 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 MFAP3LO75121 409 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 ZNF530Q6P9A1 599 aaPredicted RBP12.9□□□□□ -0.34
PUM3-202ENST00000397885 KSR2Q6VAB6 950 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.34
PUM3-202ENST00000397885 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
PUM3-202ENST00000397885 COL24A1Q17RW2 1714 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 DDX58O95786 925 aaKnown RBP12.89□□□□□ -0.35
PUM3-202ENST00000397885 LSP1P33241 339 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 PBX1P40424 430 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 G3BP1Q13283 466 aaKnown RBP eCLIP12.89□□□□□ -0.35
PUM3-202ENST00000397885 RNF187Q5TA31 235 aaPredicted RBP12.89□□□□□ -0.35
PUM3-202ENST00000397885 FAM228AQ86W67 206 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 CCDC114Q96M63 670 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 PAIP2Q9BPZ3 127 aaKnown RBP12.89□□□□□ -0.35
PUM3-202ENST00000397885 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
PUM3-202ENST00000397885 CENPHQ9H3R5 247 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 LGR6Q9HBX8 967 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.89□□□□□ -0.35
PUM3-202ENST00000397885 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 FAM107AO95990 144 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 SLC5A9Q2M3M2 681 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 C1orf141Q5JVX7 400 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 NT5DC1Q5TFE4 455 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms