RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MAPK8IP1Q9UQF2 711 aa27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 GSG1L2A8MUP6 293 aa27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 PATL2C9JE40 543 aaKnown RBP27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 ERCC5P28715 1186 aaPredicted RBP27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 FXR1P51114 621 aaKnown RBP eCLIP27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 SYMPKQ92797 1274 aaKnown RBP27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 MYO6Q9UM54 1294 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 CTNND2Q9UQB3 1225 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 PBX1P40424 430 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 LIFRP42702 1097 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 A0A0G2JS52 829 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 ERICH2A1L162 156 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 DPYDQ12882 1025 aa27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 ADD3Q9UEY8 706 aaKnown RBP27.09■■□□□ 1.93
CSNK1E-203ENST00000396832 AARSP49588 968 aaKnown RBP eCLIP27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 AKAP17AQ02040 695 aaKnown RBP27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 SART3Q15020 963 aaKnown RBP27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 ZNF174Q15697 407 aa27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 TADA2BQ86TJ2 420 aa27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 CRACR2BQ8N4Y2 399 aaPredicted RBP27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 NCAPGQ9BPX3 1015 aa27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 VIPAS39Q9H9C1 493 aa27.08■■□□□ 1.93
CSNK1E-203ENST00000396832 KDM4FA0A1W2PPD8 638 aa27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 PRPF6O94906 941 aaKnown RBP27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 CPP00450 1065 aa27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 ZNF654Q8IZM8 581 aa27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 CCDC148Q8NFR7 591 aa27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 WASF1Q92558 559 aa27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 SRPRBQ9Y5M8 271 aaKnown RBP27.08■■□□□ 1.92
CSNK1E-203ENST00000396832 CNGA4Q8IV77 575 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 CTCFLQ8NI51 663 aaPredicted RBP27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 VPS16Q9H269 839 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 FBXO3Q9UK99 471 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 GYPCP04921 128 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 SPATA1Q5VX52 437 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 MICALL1Q8N3F8 863 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 CHD4Q14839 1912 aa27.07■■□□□ 1.92
CSNK1E-203ENST00000396832 A0A087WUV0 522 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 CYP2D7A0A087X1C5 515 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 DEXIO95424 95 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 IL2RBP14784 551 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 BCAMP50895 628 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 GIGYF2Q6Y7W6 1299 aaKnown RBP27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 PAXIP1Q6ZW49 1069 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 FOXP1Q9H334 677 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 TFR2Q9UP52 801 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 MST1RQ04912 1400 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 MAP3K15Q6ZN16 1313 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 STK36Q9NRP7 1315 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 RNF225M0QZC1 329 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 ARHGAP25P42331 645 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 AMPD2Q01433 879 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 MAP3K12Q12852 859 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 FANCBQ8NB91 859 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 MYCBPQ99417 103 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 UBAC1Q9BSL1 405 aa27.06■■□□□ 1.92
CSNK1E-203ENST00000396832 ATRNO75882 1429 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 WDR17Q8IZU2 1322 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 E2F4Q16254 413 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 TNS3Q68CZ2 1445 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 ZNF335Q9H4Z2 1342 aaPredicted RBP27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 ERVK-24P63145 666 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 SUGP1Q8IWZ8 645 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 RIN2Q8WYP3 895 aaPredicted RBP27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 PAGE5Q96GU1 130 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 MYO1AQ9UBC5 1043 aa27.05■■□□□ 1.92
CSNK1E-203ENST00000396832 FILIP1LQ4L180 1135 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 MMS22LQ6ZRQ5 1243 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 TMTC1Q8IUR5 882 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 PIGBQ92521 554 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 PLA2G12BQ9BX93 195 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 TRIM10Q9UDY6 481 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 HPCAL4Q9UM19 191 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 ABCC12Q96J65 1359 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 ARID4AP29374 1257 aaPredicted RBP27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 SPATA20Q8TB22 786 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 CCDC51Q96ER9 411 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 KRT23Q9C075 422 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 UBR2Q8IWV8 1755 aa27.04■■□□□ 1.92
CSNK1E-203ENST00000396832 PES1O00541 588 aaKnown RBP27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 PLEKHA8P1O95397 391 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 EIF5P55010 431 aaKnown RBP27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 PUM3Q15397 648 aaKnown RBP27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 KANK3Q6NY19 840 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 SMARCC1Q92922 1105 aaPredicted RBP27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 CTAGE1Q96RT6 745 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 TAB2Q9NYJ8 693 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 ABCF2Q9UG63 623 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 ZBTB1Q9Y2K1 713 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 TRIM75PA6NK02 468 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 SLF1Q9BQI6 1058 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 TNKSO95271 1327 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 USP14P54578 494 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 EEF2KMTQ96G04 330 aa27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 NUP88Q99567 741 aaPredicted RBP27.03■■□□□ 1.92
CSNK1E-203ENST00000396832 FECHP22830 423 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 GDAP1L1Q96MZ0 367 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 CNNM2Q9H8M5 875 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 LRP2BPQ9P2M1 347 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 V9GY48 417 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms