RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ARPP21Q9UBL0 812 aaPredicted RBP21.95■■□□□ 1.1
FXN-203ENST00000396366 TMX2Q9Y320 296 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 RLFQ13129 1914 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 CEP290O15078 2479 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 H0YGN5 161 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 ERC2O15083 957 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 FARP2O94887 1054 aaPredicted RBP21.94■■□□□ 1.1
FXN-203ENST00000396366 SLC34A2O95436 690 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 ZFYP08048 801 aaPredicted RBP21.94■■□□□ 1.1
FXN-203ENST00000396366 ATP2B2Q01814 1243 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 SBK1Q52WX2 424 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 WDR78Q5VTH9 848 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 SOCS4Q8WXH5 440 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 DPF3Q92784 378 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 CRISPLD2Q9H0B8 497 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 ARHGEF10LQ9HCE6 1279 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 SALL3Q9BXA9 1300 aa21.94■■□□□ 1.1
FXN-203ENST00000396366 GLRX3O76003 335 aaKnown RBP21.93■■□□□ 1.1
FXN-203ENST00000396366 XRCC5P13010 732 aaKnown RBP21.93■■□□□ 1.1
FXN-203ENST00000396366 RPTORQ8N122 1335 aa21.93■■□□□ 1.1
FXN-203ENST00000396366 FSD1Q9BTV5 496 aa21.93■■□□□ 1.1
FXN-203ENST00000396366 VCPKMTQ9H867 229 aa21.93■■□□□ 1.1
FXN-203ENST00000396366 CWC22Q9HCG8 908 aaKnown RBP21.93■■□□□ 1.1
FXN-203ENST00000396366 HMX1Q9NP08 348 aaPredicted RBP21.93■■□□□ 1.1
FXN-203ENST00000396366 APPP05067 770 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 PRKAR2AP13861 404 aaKnown RBP21.92■■□□□ 1.1
FXN-203ENST00000396366 RASA1P20936 1047 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 RGS2P41220 211 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 CCNA1P78396 465 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 GIMAP6Q6P9H5 292 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 HOXC10Q9NYD6 342 aa21.92■■□□□ 1.1
FXN-203ENST00000396366 PATL2C9JE40 543 aaKnown RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 ZKSCAN1P17029 563 aaPredicted RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 PTPREP23469 700 aa21.91■■□□□ 1.1
FXN-203ENST00000396366 CACNB2Q08289 660 aaPredicted RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 MAP2K5Q13163 448 aa21.91■■□□□ 1.1
FXN-203ENST00000396366 HDAC1Q13547 482 aaPredicted RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 MAP3K21Q5TCX8 1036 aa21.91■■□□□ 1.1
FXN-203ENST00000396366 SAMD1Q6SPF0 538 aaPredicted RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 IFNL3Q8IZI9 196 aa21.91■■□□□ 1.1
FXN-203ENST00000396366 DIS3LQ8TF46 1054 aaKnown RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 MOV10L1Q9BXT6 1211 aaKnown RBP21.91■■□□□ 1.1
FXN-203ENST00000396366 FLRT1Q9NZU1 646 aa21.91■■□□□ 1.1
FXN-203ENST00000396366 FLOT1O75955 427 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 DSG3P32926 999 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 TDO2P48775 406 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 ZMYM1Q5SVZ6 1142 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 LPAR1Q92633 364 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 ATG4CQ96DT6 458 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 PAWRQ96IZ0 340 aaKnown RBP21.9■■□□□ 1.1
FXN-203ENST00000396366 MKNK2Q9HBH9 465 aa21.9■■□□□ 1.1
FXN-203ENST00000396366 PRDM1O75626 825 aa21.89■■□□□ 1.09
FXN-203ENST00000396366 GNAT2P19087 354 aa21.89■■□□□ 1.09
FXN-203ENST00000396366 CCND3P30281 292 aaPredicted RBP21.89■■□□□ 1.09
FXN-203ENST00000396366 GCC1Q96CN9 775 aa21.89■■□□□ 1.09
FXN-203ENST00000396366 APBA2Q99767 749 aa21.89■■□□□ 1.09
FXN-203ENST00000396366 SH2D4AQ9H788 454 aa21.89■■□□□ 1.09
FXN-203ENST00000396366 FBXO28Q9NVF7 368 aa21.89■■□□□ 1.09
FXN-203ENST00000396366 GREB1LQ9C091 1923 aaPredicted RBP21.88■■□□□ 1.09
FXN-203ENST00000396366 PARP14Q460N5 1801 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 SLC15A5A6NIM6 579 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 RAD21O60216 631 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 MNX1P50219 401 aaPredicted RBP21.88■■□□□ 1.09
FXN-203ENST00000396366 HABP4Q5JVS0 413 aaKnown RBP21.88■■□□□ 1.09
FXN-203ENST00000396366 CCDC129Q6ZRS4 1044 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 NPLOC4Q8TAT6 608 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 SPATC1LQ9H0A9 340 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 ZBTB47Q9UFB7 747 aaPredicted RBP21.88■■□□□ 1.09
FXN-203ENST00000396366 COLQQ9Y215 455 aaPredicted RBP21.88■■□□□ 1.09
FXN-203ENST00000396366 A0A0G2JMZ2 1700 aa21.88■■□□□ 1.09
FXN-203ENST00000396366 ROBO3Q96MS0 1386 aa21.87■■□□□ 1.09
FXN-203ENST00000396366 WDR46O15213 610 aaKnown RBP21.87■■□□□ 1.09
FXN-203ENST00000396366 PDE1AP54750 535 aa21.87■■□□□ 1.09
FXN-203ENST00000396366 GRB14Q14449 540 aa21.87■■□□□ 1.09
FXN-203ENST00000396366 PLS1Q14651 629 aa21.87■■□□□ 1.09
FXN-203ENST00000396366 LRRFIP1Q32MZ4 808 aaKnown RBP21.87■■□□□ 1.09
FXN-203ENST00000396366 TRMT44Q8IYL2 757 aaKnown RBP21.87■■□□□ 1.09
FXN-203ENST00000396366 HTATIP2Q9BUP3 242 aa21.87■■□□□ 1.09
FXN-203ENST00000396366 STAP2Q9UGK3 403 aa21.87■■□□□ 1.09
FXN-203ENST00000396366 ERCC3P19447 782 aa21.86■■□□□ 1.09
FXN-203ENST00000396366 FAM83BQ5T0W9 1011 aa21.86■■□□□ 1.09
FXN-203ENST00000396366 B4GALNT3Q6L9W6 998 aa21.86■■□□□ 1.09
FXN-203ENST00000396366 EXOC6Q8TAG9 804 aa21.86■■□□□ 1.09
FXN-203ENST00000396366 NUP88Q99567 741 aaPredicted RBP21.86■■□□□ 1.09
FXN-203ENST00000396366 GOPCQ9HD26 462 aa21.86■■□□□ 1.09
FXN-203ENST00000396366 IVNS1ABPQ9Y6Y0 642 aa21.86■■□□□ 1.09
FXN-203ENST00000396366 COL11A1P12107 1806 aaPredicted RBP21.85■■□□□ 1.09
FXN-203ENST00000396366 FOXP2O15409 715 aa21.85■■□□□ 1.09
FXN-203ENST00000396366 IGHDP01880 384 aa21.85■■□□□ 1.09
FXN-203ENST00000396366 TMEM132BQ14DG7 1078 aa21.85■■□□□ 1.09
FXN-203ENST00000396366 ZNF444Q8N0Y2 327 aaPredicted RBP21.85■■□□□ 1.09
FXN-203ENST00000396366 LNPKQ9C0E8 428 aa21.85■■□□□ 1.09
FXN-203ENST00000396366 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
FXN-203ENST00000396366 OGDHLQ9ULD0 1010 aa21.85■■□□□ 1.09
FXN-203ENST00000396366 IGKV6D-41A0A0C4DH26 115 aa21.84■■□□□ 1.09
FXN-203ENST00000396366 ADORA2AP29274 412 aa21.84■■□□□ 1.09
FXN-203ENST00000396366 CYP2C19P33261 490 aa21.84■■□□□ 1.09
FXN-203ENST00000396366 LHX8Q68G74 356 aa21.84■■□□□ 1.09
FXN-203ENST00000396366 NECAB2Q7Z6G3 386 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms