RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 HPS5Q9UPZ3 1129 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 CSADQ9Y600 493 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 CPLX1O14810 134 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 GH2P01242 217 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 GUCY1A2P33402 732 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 EVX2Q03828 476 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 NAP1L5Q96NT1 182 aaPredicted RBP10.28□□□□□ -0.76
CCR9-203ENST00000395963 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 MAF1Q9H063 256 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 INCENPQ9NQS7 918 aa10.28□□□□□ -0.76
CCR9-203ENST00000395963 TRPM7Q96QT4 1865 aa10.27□□□□□ -0.76
CCR9-203ENST00000395963 OTOFQ9HC10 1997 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 SMIM22K7EJ46 135 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 PPATQ06203 517 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 SCRN1Q12765 414 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 TRIM22Q8IYM9 498 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 WRNIP1Q96S55 665 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 SMC3Q9UQE7 1217 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.77
CCR9-203ENST00000395963 PALM3A6NDB9 673 aaPredicted RBP10.27□□□□□ -0.77
CCR9-203ENST00000395963 USP2O75604 605 aaPredicted RBP10.27□□□□□ -0.77
CCR9-203ENST00000395963 PARP1P09874 1014 aaKnown RBP10.27□□□□□ -0.77
CCR9-203ENST00000395963 EEF2P13639 858 aaKnown RBP10.27□□□□□ -0.77
CCR9-203ENST00000395963 CLCN1P35523 988 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 SEPT2Q15019 361 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 CHST3Q7LGC8 479 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 TCEANC2Q96MN5 208 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 ZKSCAN3Q9BRR0 538 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 VCPKMTQ9H867 229 aa10.27□□□□□ -0.77
CCR9-203ENST00000395963 MYPNQ86TC9 1320 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 ADM5C9JUS6 153 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 WDR46O15213 610 aaKnown RBP10.26□□□□□ -0.77
CCR9-203ENST00000395963 NUCB2P80303 420 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 FSTL1Q12841 308 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 SLC4A8Q2Y0W8 1093 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 BTNL9Q6UXG8 535 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 TMTC3Q6ZXV5 915 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 FAM160B2Q86V87 743 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 SMC1BQ8NDV3 1235 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 GPBP1L1Q9HC44 474 aaPredicted RBP10.26□□□□□ -0.77
CCR9-203ENST00000395963 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 LOC285556D6RIA3 1793 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 SPDYE5A6NIY4 337 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 CXCL11O14625 94 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 PDHBP11177 359 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 MICU3Q86XE3 530 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 ERO1BQ86YB8 467 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 STK11IPQ8N1F8 1099 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
CCR9-203ENST00000395963 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
CCR9-203ENST00000395963 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
CCR9-203ENST00000395963 PRPF3O43395 683 aaKnown RBP10.25□□□□□ -0.77
CCR9-203ENST00000395963 GDF11O95390 407 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 DEXIO95424 95 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
CCR9-203ENST00000395963 XBP1P17861 261 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 PTPRAP18433 802 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 DDIT3P35638 169 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 ZNF543Q08ER8 600 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 PPIL2Q13356 520 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 NTRK3Q16288 839 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 MIGA2Q7L4E1 593 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 CCDC83Q8IWF9 413 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 C2orf69Q8N8R5 385 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 HHIPL1Q96JK4 782 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 AKAP17AQ02040 695 aaKnown RBP10.25□□□□□ -0.77
CCR9-203ENST00000395963 SSRP1Q08945 709 aaKnown RBP10.25□□□□□ -0.77
CCR9-203ENST00000395963 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
CCR9-203ENST00000395963 RAB3GAP1Q15042 981 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 SLFN13Q68D06 897 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 PPP1R18Q6NYC8 613 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 CDAN1Q8IWY9 1227 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 GLIS2Q9BZE0 524 aaPredicted RBP10.25□□□□□ -0.77
CCR9-203ENST00000395963 NMRK2Q9NPI5 230 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 SH3GLB2Q9NR46 395 aa10.25□□□□□ -0.77
CCR9-203ENST00000395963 POLR2AP24928 1970 aaKnown RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 FAM196BA6NMK8 535 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 NMT2O60551 498 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 LARGE1O95461 756 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 RRP1BQ14684 758 aaKnown RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 SIAH1Q8IUQ4 282 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 CHURC1Q8WUH1 139 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 RIOX1Q9H6W3 641 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
CCR9-203ENST00000395963 MAD2L2Q9UI95 211 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 KCNH4Q9UQ05 1017 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 SNCAIPQ9Y6H5 919 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 PASKQ96RG2 1323 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 F5H6K3 240 aa10.24□□□□□ -0.77
CCR9-203ENST00000395963 BACE1P56817 501 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms