RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 MINPP1Q9UNW1 487 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 PP2D1A8MPX8 630 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 PNMA6AP0CW24 399 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 INF2Q27J81 1249 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 DTHD1Q6ZMT9 781 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CAPZA3Q96KX2 299 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 PHLPP2Q6ZVD8 1323 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 A0A0U1RQJ8 604 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 BMP15O95972 392 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 TUBB4AP04350 444 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 TNNT3P45378 269 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 GYS2P54840 703 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 PAK1Q13153 545 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CCDC47Q96A33 483 aaKnown RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 FAM84BQ96KN1 310 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 MRPL44Q9H9J2 332 aaKnown RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CTAGE9A4FU28 777 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CAMTA2O94983 1202 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CHMP4BP1P59074 171 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 GABPB1Q06547 395 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-203ENST00000394419 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 TRIML1Q8N9V2 468 aa11.91□□□□□ -0.5
ACTN1-203ENST00000394419 CCDC66A2RUB6 948 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 EFCAB8A8MWE9 144 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 GNPATO15228 680 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 KIF20AO95235 890 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
ACTN1-203ENST00000394419 TRIM21P19474 475 aaKnown RBP11.9□□□□□ -0.5
ACTN1-203ENST00000394419 UTP14CQ5TAP6 766 aaKnown RBP11.9□□□□□ -0.5
ACTN1-203ENST00000394419 SOGA3Q5TF21 947 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 TRIM65Q6PJ69 517 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 TGFBRAP1Q8WUH2 860 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 DRC1Q96MC2 740 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 TRIM49BA6NDI0 452 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
ACTN1-203ENST00000394419 IDEP14735 1019 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 ERCC5P28715 1186 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-203ENST00000394419 MTIF2P46199 727 aaKnown RBP11.9□□□□□ -0.5
ACTN1-203ENST00000394419 DNA2P51530 1060 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 FAM193AP78312 1265 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 GPS2Q13227 327 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 TERF2Q15554 542 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 CNGA4Q8IV77 575 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 L2HGDHQ9H9P8 463 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 ZNF446Q9NWS9 450 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 PNPLA7Q6ZV29 1317 aa11.9□□□□□ -0.5
ACTN1-203ENST00000394419 NTSR2O95665 410 aa11.9□□□□□ -0.51
ACTN1-203ENST00000394419 EIF6P56537 245 aaKnown RBP11.9□□□□□ -0.51
ACTN1-203ENST00000394419 UBE4AQ14139 1066 aa11.9□□□□□ -0.51
ACTN1-203ENST00000394419 ENOX2Q16206 610 aaKnown RBP11.9□□□□□ -0.51
ACTN1-203ENST00000394419 TMTC3Q6ZXV5 915 aa11.9□□□□□ -0.51
ACTN1-203ENST00000394419 SLC35F6Q8N357 371 aa11.9□□□□□ -0.51
ACTN1-203ENST00000394419 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.51
ACTN1-203ENST00000394419 ZNHIT6Q9NWK9 470 aaKnown RBP11.9□□□□□ -0.51
ACTN1-203ENST00000394419 KCNJ18B7U540 433 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-203ENST00000394419 ENC1O14682 589 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 NAPAP54920 295 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-203ENST00000394419 KCNJ12Q14500 433 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 RAD9BQ6WBX8 426 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 CDK5RAP3Q96JB5 506 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 TANGO6Q9C0B7 1094 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 KIF1AQ12756 1690 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 LAMA4Q16363 1823 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 LDHBP07195 334 aaKnown RBP11.89□□□□□ -0.51
ACTN1-203ENST00000394419 LMAN1P49257 510 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 FXR1P51114 621 aaKnown RBP eCLIP11.89□□□□□ -0.51
ACTN1-203ENST00000394419 ASIC1P78348 528 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 KRT31Q15323 416 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 PKN1Q16512 942 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 BLIDQ8IZY5 108 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 STAG2Q8N3U4 1231 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 NEK11Q8NG66 645 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-203ENST00000394419 TCP11L1Q9NUJ3 509 aa11.89□□□□□ -0.51
ACTN1-203ENST00000394419 TADA3O75528 432 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 OAS2P29728 719 aaKnown RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 TROAPQ12815 778 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 NR1I3Q14994 352 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 SEC23AQ15436 765 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms