RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 NLGN2Q8NFZ4 835 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 DNAJC25Q9H1X3 360 aa23.07■■□□□ 1.28
PTPN11-202ENST00000392597 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
PTPN11-202ENST00000392597 SYKP43405 635 aa23.06■■□□□ 1.28
PTPN11-202ENST00000392597 LZTS2Q9BRK4 669 aa23.06■■□□□ 1.28
PTPN11-202ENST00000392597 SH3GLB2Q9NR46 395 aa23.06■■□□□ 1.28
PTPN11-202ENST00000392597 KIAA1468Q9P260 1216 aa23.06■■□□□ 1.28
PTPN11-202ENST00000392597 PLIN4Q96Q06 1357 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 BMP15O95972 392 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 PTPREP23469 700 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 LUZP1Q86V48 1076 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 FAM177A1Q8N128 213 aaPredicted RBP23.05■■□□□ 1.28
PTPN11-202ENST00000392597 MRIQ9BWK5 157 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 NOVP48745 357 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 NPY5RQ15761 445 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 ZNF579Q8NAF0 562 aaKnown RBP23.05■■□□□ 1.28
PTPN11-202ENST00000392597 TNFRSF25Q93038 417 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 TEKT1Q969V4 418 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 TMEM47Q9BQJ4 181 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 CABP5Q9NP86 173 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 MAD2L2Q9UI95 211 aa23.05■■□□□ 1.28
PTPN11-202ENST00000392597 hCG_1642624A0A1W2PR95 340 aa23.04■■□□□ 1.28
PTPN11-202ENST00000392597 MYO3BQ8WXR4 1341 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 TRIM75PA6NK02 468 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 CALML3P27482 149 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 STRIP1Q5VSL9 837 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 CC2D2BQ6DHV5 1058 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 ELOA2Q8IYF1 753 aaPredicted RBP23.03■■□□□ 1.28
PTPN11-202ENST00000392597 FBXO2Q9UK22 296 aaPredicted RBP23.03■■□□□ 1.28
PTPN11-202ENST00000392597 STX8Q9UNK0 236 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 PCDHB6Q9Y5E3 794 aa23.03■■□□□ 1.28
PTPN11-202ENST00000392597 BAZ2BQ9UIF8 2168 aaKnown RBP23.03■■□□□ 1.28
PTPN11-202ENST00000392597 PTMAP06454 111 aaKnown RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 GABPAQ06546 454 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 SRPRBQ9Y5M8 271 aaKnown RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 PALM3A6NDB9 673 aaPredicted RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 F8W031 263 aaPredicted RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 MSNP26038 577 aaKnown RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 HDLBPQ00341 1268 aaKnown RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 IQCB1Q15051 598 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 DALRD3Q5D0E6 543 aaKnown RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 CEP57L1Q8IYX8 460 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 C7orf43Q8WVR3 580 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 CLIC6Q96NY7 704 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 NAT10Q9H0A0 1025 aaKnown RBP23.02■■□□□ 1.28
PTPN11-202ENST00000392597 USP40Q9NVE5 1235 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 SWAP70Q9UH65 585 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 ZKSCAN5Q9Y2L8 839 aa23.02■■□□□ 1.28
PTPN11-202ENST00000392597 AP5Z1O43299 807 aa23.01■■□□□ 1.27
PTPN11-202ENST00000392597 TOP1P11387 765 aaKnown RBP23.01■■□□□ 1.27
PTPN11-202ENST00000392597 TRAPPC10P48553 1259 aa23.01■■□□□ 1.27
PTPN11-202ENST00000392597 NLRP5P59047 1200 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 ZRSR1Q15695 479 aaKnown RBP23■■□□□ 1.27
PTPN11-202ENST00000392597 STAG2Q8N3U4 1231 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 ZDHHC15Q96MV8 337 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 KCNH3Q9ULD8 1083 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 ZNF646O15015 1829 aaPredicted RBP23■■□□□ 1.27
PTPN11-202ENST00000392597 MYH8P13535 1937 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 SMARCA1P28370 1054 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 APOBEC3HQ6NTF7 200 aaKnown RBP23■■□□□ 1.27
PTPN11-202ENST00000392597 C11orf57Q6ZUT1 292 aaPredicted RBP23■■□□□ 1.27
PTPN11-202ENST00000392597 MXD3Q9BW11 206 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 SPZ1Q9BXG8 430 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 DBNDD1Q9H9R9 158 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 FAM13BQ9NYF5 915 aa23■■□□□ 1.27
PTPN11-202ENST00000392597 CRKP46108 304 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 SCNN1DP51172 638 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 PLCB2Q00722 1185 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 PICALMQ13492 652 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 GALNT17Q6IS24 598 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 CDC42EP5Q6NZY7 148 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 SUPT20HQ8NEM7 779 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 BPIFA3Q9BQP9 254 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 DDX4Q9NQI0 724 aaKnown RBP22.99■■□□□ 1.27
PTPN11-202ENST00000392597 ADAMTSL1Q8N6G6 1762 aa22.99■■□□□ 1.27
PTPN11-202ENST00000392597 GOLGA6L19H0YKK7 550 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 ECE2O60344 883 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 GRIPAP1Q4V328 841 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 DACT2Q5SW24 774 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 CEP95Q96GE4 821 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 OSBPL5Q9H0X9 879 aaPredicted RBP22.98■■□□□ 1.27
PTPN11-202ENST00000392597 SCN9AQ15858 1988 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 EARS2Q5JPH6 523 aaKnown RBP22.98■■□□□ 1.27
PTPN11-202ENST00000392597 CCDC148Q8NFR7 591 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 FERMT2Q96AC1 680 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 SERPINB13Q9UIV8 391 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 TUBE1Q9UJT0 475 aa22.98■■□□□ 1.27
PTPN11-202ENST00000392597 FAM205CA6NFA0 338 aa22.97■■□□□ 1.27
PTPN11-202ENST00000392597 PARP1P09874 1014 aaKnown RBP22.97■■□□□ 1.27
PTPN11-202ENST00000392597 SOGA3Q5TF21 947 aa22.97■■□□□ 1.27
PTPN11-202ENST00000392597 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.97■■□□□ 1.27
PTPN11-202ENST00000392597 HOOK1Q9UJC3 728 aaKnown RBP22.97■■□□□ 1.27
PTPN11-202ENST00000392597 NLRP12P59046 1061 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 KIAA2012Q0VF49 1180 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 SARM1Q6SZW1 724 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 KRBA2Q6ZNG9 492 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 DAGLBQ8NCG7 672 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 EHD4Q9H223 541 aa22.96■■□□□ 1.27
PTPN11-202ENST00000392597 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms