RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
ALK-201ENST00000389048 MYRIPQ8NFW9 859 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 EXOC7Q9UPT5 735 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 CLTAP09496 248 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.14■□□□□ 0.33
ALK-201ENST00000389048 PLCB1Q9NQ66 1216 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 KCTD16Q68DU8 428 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 VAMP4O75379 141 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 CHMP6Q96FZ7 201 aa17.14■□□□□ 0.33
ALK-201ENST00000389048 RIOK1Q9BRS2 568 aaKnown RBP17.14■□□□□ 0.33
ALK-201ENST00000389048 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
ALK-201ENST00000389048 SLC12A1Q13621 1099 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 LLGL1Q15334 1064 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 FIS1Q9Y3D6 152 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 KRIT1O00522 736 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 GSTA1P08263 222 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 GSTA2P09210 222 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
ALK-201ENST00000389048 ARHGAP24Q8N264 748 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 CACYBPQ9HB71 228 aaKnown RBP17.13■□□□□ 0.33
ALK-201ENST00000389048 HIBADHP31937 336 aaKnown RBP17.13■□□□□ 0.33
ALK-201ENST00000389048 TECP42680 631 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 TMTC4Q5T4D3 741 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 PCF11O94913 1555 aaKnown RBP17.13■□□□□ 0.33
ALK-201ENST00000389048 CUTAO60888 179 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 ZSCAN26Q16670 478 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 HS1BP3Q53T59 392 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 JADE1Q6IE81 842 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 TTC6Q86TZ1 520 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 ABCF3Q9NUQ8 709 aa17.13■□□□□ 0.33
ALK-201ENST00000389048 SLC4A1P02730 911 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
ALK-201ENST00000389048 CARD10Q9BWT7 1032 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
ALK-201ENST00000389048 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 ANKRD2Q9GZV1 360 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 RAD50Q92878 1312 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 BCRP11274 1271 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 PPP4R1Q8TF05 950 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 PDCD7Q8N8D1 485 aaKnown RBP17.12■□□□□ 0.33
ALK-201ENST00000389048 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
ALK-201ENST00000389048 ANLNQ9NQW6 1124 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
ALK-201ENST00000389048 ANGEL1Q9UNK9 670 aaKnown RBP17.12■□□□□ 0.33
ALK-201ENST00000389048 ZMYND10O75800 440 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 RCN2Q14257 317 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 SEC31AO94979 1220 aaKnown RBP17.11■□□□□ 0.33
ALK-201ENST00000389048 KRT40Q6A162 431 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 TROVE2P10155 538 aaKnown RBP eCLIP17.11■□□□□ 0.33
ALK-201ENST00000389048 IL2RBP14784 551 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 HP1BP3Q5SSJ5 553 aaPredicted RBP17.11■□□□□ 0.33
ALK-201ENST00000389048 CFAP61Q8NHU2 1237 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 AMFRQ9UKV5 643 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 RFX1P22670 979 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 LGSNQ5TDP6 509 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 MCUQ8NE86 351 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 SLC1A4P43007 532 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 TMTC1Q8IUR5 882 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
ALK-201ENST00000389048 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
ALK-201ENST00000389048 NSD2O96028 1365 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 SYCE1Q8N0S2 351 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 NME8Q8N427 588 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
ALK-201ENST00000389048 KDRP35968 1356 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 KCNJ18B7U540 433 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 FLOT1O75955 427 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 INPP1P49441 399 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 KCNJ12Q14500 433 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 SPATA17Q96L03 361 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 RAB20Q9NX57 234 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 SAR1BQ9Y6B6 198 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 RNF40O75150 1001 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 NR1I2O75469 434 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 LRCH2Q5VUJ6 765 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 METTL14Q9HCE5 456 aaKnown RBP17.1■□□□□ 0.33
ALK-201ENST00000389048 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
ALK-201ENST00000389048 TESPA1A2RU30 521 aaPredicted RBP17.09■□□□□ 0.33
ALK-201ENST00000389048 POC1B-GALNT4F8VUJ3 575 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 STAM2O75886 525 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 ZAP70P43403 619 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 IFNAR2P48551 515 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
ALK-201ENST00000389048 RASSF2P50749 326 aa17.09■□□□□ 0.33
ALK-201ENST00000389048 RAB3IPQ96QF0 476 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms