RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ASIC1P78348 528 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 POLR2DO15514 142 aaKnown RBP21.22■□□□□ 0.99
CSPG5-202ENST00000383738 EAPPQ56P03 285 aaPredicted RBP21.22■□□□□ 0.99
CSPG5-202ENST00000383738 EEF2KMTQ96G04 330 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 STRBPQ96SI9 672 aaKnown RBP21.22■□□□□ 0.99
CSPG5-202ENST00000383738 CCDC174Q6PII3 467 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 NMT2O60551 498 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 PNMA6AP0CW24 399 aaPredicted RBP21.22■□□□□ 0.99
CSPG5-202ENST00000383738 MYL5Q02045 173 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 PPP1R13BQ96KQ4 1090 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 LEMD3Q9Y2U8 911 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 APOA5Q6Q788 366 aa21.22■□□□□ 0.99
CSPG5-202ENST00000383738 UBN2Q6ZU65 1347 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 CFBP00751 764 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 MXD3Q9BW11 206 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 IVLP07476 585 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 CALML3P27482 149 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 ARID4AP29374 1257 aaPredicted RBP21.21■□□□□ 0.99
CSPG5-202ENST00000383738 SLC16A2P36021 539 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 USP8P40818 1118 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 MTIF2P46199 727 aaKnown RBP21.21■□□□□ 0.99
CSPG5-202ENST00000383738 GPR162Q16538 588 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 CEP57Q86XR8 500 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 TDRD7Q8NHU6 1098 aaKnown RBP21.21■□□□□ 0.99
CSPG5-202ENST00000383738 SCLT1Q96NL6 688 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 CLIC6Q96NY7 704 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 PSMB7Q99436 277 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 PDE11AQ9HCR9 933 aa21.21■□□□□ 0.99
CSPG5-202ENST00000383738 BIN2Q9UBW5 565 aaPredicted RBP21.21■□□□□ 0.99
CSPG5-202ENST00000383738 WTIPA6NIX2 430 aaPredicted RBP21.21■□□□□ 0.99
CSPG5-202ENST00000383738 ATP1A3P13637 1013 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 TRIM28Q13263 835 aaKnown RBP21.2■□□□□ 0.98
CSPG5-202ENST00000383738 KIFC2Q96AC6 838 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 FAM84BQ96KN1 310 aaPredicted RBP21.2■□□□□ 0.98
CSPG5-202ENST00000383738 FAM170AA1A519 330 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 CTAGE9A4FU28 777 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
CSPG5-202ENST00000383738 WWC2Q6AWC2 1192 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 KLRF2D3W0D1 207 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 COBLO75128 1261 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 NDUFA8P51970 172 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 PNOCQ13519 176 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 TNIP1Q15025 636 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 INTS5Q6P9B9 1019 aaKnown RBP21.2■□□□□ 0.98
CSPG5-202ENST00000383738 DTHD1Q6ZMT9 781 aa21.2■□□□□ 0.98
CSPG5-202ENST00000383738 KRI1Q8N9T8 703 aaKnown RBP21.2■□□□□ 0.98
CSPG5-202ENST00000383738 CCNT1O60563 726 aaKnown RBP21.19■□□□□ 0.98
CSPG5-202ENST00000383738 NSMFQ6X4W1 530 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 TRIM47Q96LD4 638 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 GOLGA6L10A6NI86 522 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 KLRK1P26718 216 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 ATRIPQ8WXE1 791 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 CPDO75976 1380 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 OVOS2A0A0G2JMS6 1433 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 KDM6AO15550 1401 aaPredicted RBP21.19■□□□□ 0.98
CSPG5-202ENST00000383738 DDX39AO00148 427 aaKnown RBP21.19■□□□□ 0.98
CSPG5-202ENST00000383738 ZNF34Q8IZ26 560 aa21.19■□□□□ 0.98
CSPG5-202ENST00000383738 MAEAQ7L5Y9 396 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 BRAPQ7Z569 592 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 TBC1D10CQ8IV04 446 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 COL3A1P02461 1466 aaPredicted RBP21.18■□□□□ 0.98
CSPG5-202ENST00000383738 GOLGA6L9A6NEM1 432 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 TRIM66O15016 1216 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 SORBS3O60504 671 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 GNA11P29992 359 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 NR5A1Q13285 461 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 MAP9Q49MG5 647 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 TTC19Q6DKK2 380 aaPredicted RBP21.18■□□□□ 0.98
CSPG5-202ENST00000383738 SH3RF3Q8TEJ3 882 aaPredicted RBP21.18■□□□□ 0.98
CSPG5-202ENST00000383738 ZNF526Q8TF50 670 aaPredicted RBP21.18■□□□□ 0.98
CSPG5-202ENST00000383738 ARHGAP23Q9P227 1491 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 NFE2L3Q9Y4A8 694 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 ATP10DQ9P241 1426 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 PFKFB2O60825 505 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 USP17L2Q6R6M4 530 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 CD209Q9NNX6 404 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 ARPP21Q9UBL0 812 aaPredicted RBP21.18■□□□□ 0.98
CSPG5-202ENST00000383738 CDC25AP30304 524 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 MYSM1Q5VVJ2 828 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 PRR5LQ6MZQ0 368 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 PGBD1Q96JS3 809 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 KIAA1468Q9P260 1216 aa21.18■□□□□ 0.98
CSPG5-202ENST00000383738 HLTFQ14527 1009 aaKnown RBP eCLIP21.17■□□□□ 0.98
CSPG5-202ENST00000383738 MRFAP1L1Q96HT8 127 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 FANCLQ9NW38 375 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 HDXQ7Z353 690 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.17■□□□□ 0.98
CSPG5-202ENST00000383738 PCDHA7Q9UN72 937 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 EBAG9O00559 213 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 GPSM2P81274 684 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 AOC3Q16853 763 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 CSRNP1Q96S65 589 aa21.17■□□□□ 0.98
CSPG5-202ENST00000383738 LLPHQ9BRT6 129 aaKnown RBP21.17■□□□□ 0.98
CSPG5-202ENST00000383738 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
CSPG5-202ENST00000383738 ZMYND10O75800 440 aa21.16■□□□□ 0.98
CSPG5-202ENST00000383738 NKX1-1Q15270 411 aaPredicted RBP21.16■□□□□ 0.98
CSPG5-202ENST00000383738 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
CSPG5-202ENST00000383738 NBPF11Q86T75 865 aa21.16■□□□□ 0.98
CSPG5-202ENST00000383738 ZNF274Q96GC6 653 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms