RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 USP17L11C9JVI0 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L18D6R9N7 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L22D6RA61 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L17D6RBQ6 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L19D6RCP7 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L20D6RJB6 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 PDHXO00330 501 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 IGF2BP3O00425 579 aaKnown RBP eCLIP20.79■□□□□ 0.92
CD9-202ENST00000382515 TOP1P11387 765 aaKnown RBP20.79■□□□□ 0.92
CD9-202ENST00000382515 MCM5P33992 734 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L24Q0WX57 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 GMCL1P1Q8NEA9 526 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 F5H6K3 240 aa20.78■□□□□ 0.92
CD9-202ENST00000382515 PSMA5P28066 241 aa20.78■□□□□ 0.92
CD9-202ENST00000382515 KLRC3Q07444 240 aa20.78■□□□□ 0.92
CD9-202ENST00000382515 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
CD9-202ENST00000382515 GTF3C2Q8WUA4 911 aaPredicted RBP20.78■□□□□ 0.92
CD9-202ENST00000382515 NEK1Q96PY6 1258 aa20.78■□□□□ 0.92
CD9-202ENST00000382515 PARK7Q99497 189 aaKnown RBP20.78■□□□□ 0.92
CD9-202ENST00000382515 HOXC10Q9NYD6 342 aa20.78■□□□□ 0.92
CD9-202ENST00000382515 WDR46O15213 610 aaKnown RBP20.77■□□□□ 0.92
CD9-202ENST00000382515 TRPA1O75762 1119 aa20.77■□□□□ 0.92
CD9-202ENST00000382515 ANAPC15P60006 121 aa20.77■□□□□ 0.92
CD9-202ENST00000382515 RCSD1Q6JBY9 416 aa20.77■□□□□ 0.92
CD9-202ENST00000382515 TMEM87BQ96K49 555 aa20.77■□□□□ 0.92
CD9-202ENST00000382515 WDR19Q8NEZ3 1342 aa20.77■□□□□ 0.91
CD9-202ENST00000382515 PCNTO95613 3336 aa20.76■□□□□ 0.91
CD9-202ENST00000382515 DOCK1Q14185 1865 aa20.76■□□□□ 0.91
CD9-202ENST00000382515 TAF1CQ15572 869 aaPredicted RBP20.76■□□□□ 0.91
CD9-202ENST00000382515 C8orf34Q49A92 452 aa20.76■□□□□ 0.91
CD9-202ENST00000382515 CATSPERGQ6ZRH7 1159 aa20.76■□□□□ 0.91
CD9-202ENST00000382515 STOX1Q6ZVD7 989 aa20.76■□□□□ 0.91
CD9-202ENST00000382515 MB21D2Q8IYB1 491 aaPredicted RBP20.76■□□□□ 0.91
CD9-202ENST00000382515 TLR2O60603 784 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 VCAM1P19320 739 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 GCLCP48506 637 aaPredicted RBP20.75■□□□□ 0.91
CD9-202ENST00000382515 IRX3P78415 501 aaPredicted RBP20.75■□□□□ 0.91
CD9-202ENST00000382515 COG2Q14746 738 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 DHX32Q7L7V1 743 aaKnown RBP20.75■□□□□ 0.91
CD9-202ENST00000382515 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 GMCL1Q96IK5 515 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 TMEM47Q9BQJ4 181 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 OTOFQ9HC10 1997 aa20.75■□□□□ 0.91
CD9-202ENST00000382515 IFIT3O14879 490 aaKnown RBP20.74■□□□□ 0.91
CD9-202ENST00000382515 NMT2O60551 498 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
CD9-202ENST00000382515 TREML2Q5T2D2 321 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 IFIT1BQ5T764 474 aaKnown RBP20.74■□□□□ 0.91
CD9-202ENST00000382515 CLEC10AQ8IUN9 316 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 TM6SF1Q9BZW5 370 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 SNX14Q9Y5W7 946 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 TAF6LQ9Y6J9 622 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 TNKSO95271 1327 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 MYPNQ86TC9 1320 aa20.74■□□□□ 0.91
CD9-202ENST00000382515 PLA2G6O60733 806 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 NDUFB10O96000 172 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 LIFRP42702 1097 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 CTCFP49711 727 aaPredicted RBP20.73■□□□□ 0.91
CD9-202ENST00000382515 SLFN13Q68D06 897 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 LBX2Q6XYB7 198 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 CYB5R4Q7L1T6 521 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 ENAHQ8N8S7 591 aaPredicted RBP20.73■□□□□ 0.91
CD9-202ENST00000382515 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 DCAF4Q8WV16 495 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 ASCC2Q9H1I8 757 aaPredicted RBP20.73■□□□□ 0.91
CD9-202ENST00000382515 RPAP3Q9H6T3 665 aaPredicted RBP20.73■□□□□ 0.91
CD9-202ENST00000382515 KAT14Q9H8E8 782 aa20.73■□□□□ 0.91
CD9-202ENST00000382515 THSD7BQ9C0I4 1608 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 FDX1P10109 184 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 SLC1A4P43007 532 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 SEC23AQ15436 765 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 FBXL16Q8N461 479 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 IL27Q8NEV9 243 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 SMCR8Q8TEV9 937 aaPredicted RBP20.72■□□□□ 0.91
CD9-202ENST00000382515 CHURC1Q8WUH1 139 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 ZKSCAN3Q9BRR0 538 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 UPF2Q9HAU5 1272 aaKnown RBP20.72■□□□□ 0.91
CD9-202ENST00000382515 LAMB1P07942 1786 aa20.72■□□□□ 0.91
CD9-202ENST00000382515 PRC1O43663 620 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 HSPA1AP0DMV8 641 aaKnown RBP20.71■□□□□ 0.91
CD9-202ENST00000382515 HSPA1BP0DMV9 641 aaKnown RBP20.71■□□□□ 0.91
CD9-202ENST00000382515 BMP3P12645 472 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 EXOSC10Q01780 885 aaKnown RBP20.71■□□□□ 0.91
CD9-202ENST00000382515 CRHR2Q13324 411 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 WTAPQ15007 396 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 ARHGEF6Q15052 776 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 TMEM67Q5HYA8 995 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 SPICE1Q8N0Z3 855 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 MB21D1Q8N884 522 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 PNMA1Q8ND90 353 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
CD9-202ENST00000382515 RAD21O60216 631 aa20.7■□□□□ 0.9
CD9-202ENST00000382515 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
CD9-202ENST00000382515 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
CD9-202ENST00000382515 GPATCH4Q5T3I0 446 aaKnown RBP20.7■□□□□ 0.9
CD9-202ENST00000382515 BLOC1S2Q6QNY1 142 aa20.7■□□□□ 0.9
CD9-202ENST00000382515 C17orf99Q6UX52 265 aa20.7■□□□□ 0.9
CD9-202ENST00000382515 FAM160B2Q86V87 743 aa20.7■□□□□ 0.9
CD9-202ENST00000382515 LRRC47Q8N1G4 583 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms