RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 LLPHQ9BRT6 129 aaKnown RBP16.79■□□□□ 0.28
VLDLR-202ENST00000382099 DMGDHQ9UI17 866 aaKnown RBP16.79■□□□□ 0.28
VLDLR-202ENST00000382099 MFAP3LO75121 409 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 YEATS4O95619 227 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 CDC25AP30304 524 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 LRRC23Q53EV4 343 aaPredicted RBP16.79■□□□□ 0.28
VLDLR-202ENST00000382099 EPAS1Q99814 870 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
VLDLR-202ENST00000382099 MDH1P40925 334 aaKnown RBP16.78■□□□□ 0.28
VLDLR-202ENST00000382099 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
VLDLR-202ENST00000382099 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
VLDLR-202ENST00000382099 CACNA2D3Q8IZS8 1091 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 ELF3P78545 371 aaPredicted RBP16.78■□□□□ 0.28
VLDLR-202ENST00000382099 PPARAQ07869 468 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 SPATA21Q7Z572 469 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
VLDLR-202ENST00000382099 IFT81Q8WYA0 676 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 LRRC1Q9BTT6 524 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 RGL1Q9NZL6 768 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 MYO1AQ9UBC5 1043 aa16.78■□□□□ 0.28
VLDLR-202ENST00000382099 ERICH2A1L162 156 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 MXRA7P84157 204 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 C1QTNF12Q5T7M4 302 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 CWF19L1Q69YN2 538 aaKnown RBP16.77■□□□□ 0.28
VLDLR-202ENST00000382099 CPLX4Q7Z7G2 160 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 TRIM4Q9C037 500 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 PCDHGC5Q9Y5F6 944 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 ACEP12821 1306 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 AHCYL1O43865 530 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 IQCEQ6IPM2 695 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 MYLK4Q86YV6 388 aaPredicted RBP16.77■□□□□ 0.28
VLDLR-202ENST00000382099 TMTC1Q8IUR5 882 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 FOXP4Q8IVH2 680 aaPredicted RBP16.77■□□□□ 0.28
VLDLR-202ENST00000382099 CCDC63Q8NA47 563 aa16.77■□□□□ 0.28
VLDLR-202ENST00000382099 NOP53Q9NZM5 478 aaKnown RBP16.77■□□□□ 0.28
VLDLR-202ENST00000382099 COBLO75128 1261 aa16.77■□□□□ 0.27
VLDLR-202ENST00000382099 IDEP14735 1019 aa16.77■□□□□ 0.27
VLDLR-202ENST00000382099 NR1I3Q14994 352 aa16.77■□□□□ 0.27
VLDLR-202ENST00000382099 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.27
VLDLR-202ENST00000382099 A0A1B0GVG6 124 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 BMP6P22004 513 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 LTKP29376 864 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 ERVK-24P63145 666 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 OSBPL1AQ9BXW6 950 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 GOLGA6L10A6NI86 522 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 PDE2AO00408 941 aaPredicted RBP16.76■□□□□ 0.27
VLDLR-202ENST00000382099 CDKL5O76039 1030 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
VLDLR-202ENST00000382099 ALS2CLQ60I27 953 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 KDM7AQ6ZMT4 941 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 ZNF570Q96NI8 536 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 CORO1CQ9ULV4 474 aaPredicted RBP16.76■□□□□ 0.27
VLDLR-202ENST00000382099 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
VLDLR-202ENST00000382099 SPDYE3A6NKU9 549 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 TPP2P29144 1249 aaPredicted RBP16.75■□□□□ 0.27
VLDLR-202ENST00000382099 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 ARHGAP22Q7Z5H3 698 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 POLR3EQ9NVU0 708 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 DACH1Q9UI36 760 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 MACROD2A1Z1Q3 448 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 FESP07332 822 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 ABCD1P33897 745 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 SCNN1BP51168 640 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
VLDLR-202ENST00000382099 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 MFN1Q8IWA4 741 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 GRAMD1CQ8IYS0 662 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 CPLX1O14810 134 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 MGRN1O60291 552 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 LINGO3P0C6S8 592 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 KRT9P35527 623 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 EPHB4P54760 987 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 POLE2P56282 527 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 QPCTQ16769 361 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
VLDLR-202ENST00000382099 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 SEC16BQ96JE7 1060 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 PSMD1Q99460 953 aa16.75■□□□□ 0.27
VLDLR-202ENST00000382099 GMNCA6NCL1 334 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 KIF5BP33176 963 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 ALDH8A1Q9H2A2 487 aaPredicted RBP16.74■□□□□ 0.27
VLDLR-202ENST00000382099 MAN1B1Q9UKM7 699 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 FERP16591 822 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 C6orf89Q6UWU4 347 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 ACSBG1Q96GR2 724 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 ALS2CR12Q96Q35 445 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 CHP1Q99653 195 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 N4BP3O15049 544 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 TAF5LO75529 589 aa16.74■□□□□ 0.27
VLDLR-202ENST00000382099 CYP21A2P08686 494 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms