RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 PDE4BQ07343 736 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC62Q6P9F0 684 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 TSR2Q969E8 191 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF830Q96NB3 372 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 ZC3H12CQ9C0D7 883 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 DBF4Q9UBU7 674 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 ANGPTL2Q9UKU9 493 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 DHX9Q08211 1270 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 IQCA1Q86XH1 822 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 FOXP3Q9BZS1 431 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 CIDEBQ9UHD4 219 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 YTHDC2Q9H6S0 1430 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 LOXHD1Q8IVV2 1947 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 POTEFA5A3E0 1075 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 F8W031 263 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 POTEIP0CG38 1075 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 POTEEQ6S8J3 1075 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 APBB2Q92870 758 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 SAAL1Q96ER3 474 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 NUP88Q99567 741 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 CAPS2Q9BXY5 557 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 TRIM55Q9BYV6 548 aa5.41□□□□□ -1.54
PTPRD-203ENST00000381196 CRNKL1Q9BZJ0 848 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 TYW1Q9NV66 732 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 PAIP2BQ9ULR5 123 aaKnown RBP5.41□□□□□ -1.54
PTPRD-203ENST00000381196 ZBTB24O43167 697 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 RNF8O76064 485 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 GSTA1P08263 222 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 SSFA2P28290 1259 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 OAS2P29728 719 aaKnown RBP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 SKIDA1Q1XH10 827 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PPP1R21Q6ZMI0 780 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 RAB3IL1Q8TBN0 382 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 C8orf76Q96K31 380 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PICK1Q9NRD5 415 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 ABCC4O15439 1325 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PSMA7O14818 248 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 TMPOP42166 694 aaKnown RBP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 HSPA13P48723 471 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 GNAQP50148 359 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 SLC4A8Q2Y0W8 1093 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PRR23CQ6ZRP0 262 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 MAATS1Q7Z4T9 603 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 LZTS2Q9BRK4 669 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 HAUS8Q9BT25 410 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 MCM9Q9NXL9 1143 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PDE4DIPQ5VU43 2346 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 ZEB2O60315 1214 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 ECM2O94769 699 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 LARGE2Q8N3Y3 721 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PDCD7Q8N8D1 485 aaKnown RBP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 KIF9Q9HAQ2 790 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 LAD1O00515 517 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 STK10O94804 968 aaKnown RBP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 PLCG2P16885 1265 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 SERPINB8P50452 374 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 UBASH3AP57075 661 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 CAV1Q03135 178 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC14Q49A88 953 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 GALNT17Q6IS24 598 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 MCM10Q7L590 875 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 ATL2Q8NHH9 583 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 TMX3Q96JJ7 454 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 NOX5Q96PH1 765 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 ESYT1Q9BSJ8 1104 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 SCOCQ9UIL1 159 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 ODF2LQ9ULJ1 636 aa5.4□□□□□ -1.54
PTPRD-203ENST00000381196 NIP7Q9Y221 180 aaKnown RBP eCLIP5.4□□□□□ -1.54
PTPRD-203ENST00000381196 NCBP1Q09161 790 aaKnown RBP5.4□□□□□ -1.55
PTPRD-203ENST00000381196 LRIG3Q6UXM1 1119 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 ENAHQ8N8S7 591 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-203ENST00000381196 SUPT20HQ8NEM7 779 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 USP26Q9BXU7 913 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 ECHDC1Q9NTX5 307 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 SAMM50Q9Y512 469 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 SNAPC5O75971 98 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 RXRBP28702 533 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 TMC6Q7Z403 805 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 NIM1KQ8IY84 436 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 CKAP2LQ8IYA6 745 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 SETD1AO15047 1707 aaKnown RBP5.4□□□□□ -1.55
PTPRD-203ENST00000381196 KNL1Q8NG31 2342 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC194A0A1B0GVG4 234 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 THAP12O43422 761 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 CUTAO60888 179 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 GCKP35557 465 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 PRIM1P49642 420 aaKnown RBP5.4□□□□□ -1.55
PTPRD-203ENST00000381196 ANO6Q4KMQ2 910 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 RNF187Q5TA31 235 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-203ENST00000381196 RAB11FIP4Q86YS3 637 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 SH2D4AQ9H788 454 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 ZBTB40Q9NUA8 1239 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 BTG4Q9NY30 223 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 RNF40O75150 1001 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 SESN3P58005 492 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 CPLX4Q7Z7G2 160 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC117Q8IWD4 279 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-203ENST00000381196 FAM186BQ8IYM0 893 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 FLAD1Q8NFF5 587 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms