RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 TOGARAM2Q6ZUX3 1019 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 APTXQ7Z2E3 356 aaKnown RBP22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 GTPBP4Q9BZE4 634 aaKnown RBP22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 DCP1AQ9NPI6 582 aaPredicted RBP22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 SYNRGQ9UMZ2 1314 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 PCP11498 1178 aaKnown RBP22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 PRDX5P30044 214 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 STX17P56962 302 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 CUL4BQ13620 913 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 NR1I3Q14994 352 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 KLHL10Q6JEL2 608 aa22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 SMYD4Q8IYR2 804 aaPredicted RBP22.23■■□□□ 1.15
SHROOM1-202ENST00000378676 A0A1B0GTH6 734 aa22.22■■□□□ 1.15
SHROOM1-202ENST00000378676 ORC4O43929 436 aa22.22■■□□□ 1.15
SHROOM1-202ENST00000378676 VEGFAP15692 232 aaPredicted RBP22.22■■□□□ 1.15
SHROOM1-202ENST00000378676 DPYDQ12882 1025 aa22.22■■□□□ 1.15
SHROOM1-202ENST00000378676 FERMT2Q96AC1 680 aa22.22■■□□□ 1.15
SHROOM1-202ENST00000378676 TEX33O43247 280 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 ZSCAN12O43309 604 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 BRMS1Q9HCU9 246 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 ZNF446Q9NWS9 450 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 TNRC6CQ9HCJ0 1690 aaKnown RBP22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 GTF2E1P29083 439 aaPredicted RBP22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 PTGDRQ13258 359 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 FAM177A1Q8N128 213 aaPredicted RBP22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 CCDC24Q8N4L8 307 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 STAMQ92783 540 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 JAG2Q9Y219 1238 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 PARP3Q9Y6F1 533 aa22.21■■□□□ 1.15
SHROOM1-202ENST00000378676 SEMA3EO15041 775 aa22.2■■□□□ 1.15
SHROOM1-202ENST00000378676 ATP2C1P98194 919 aaPredicted RBP22.2■■□□□ 1.15
SHROOM1-202ENST00000378676 BARGINQ6ZT62 677 aa22.2■■□□□ 1.15
SHROOM1-202ENST00000378676 CTCFLQ8NI51 663 aaPredicted RBP22.2■■□□□ 1.15
SHROOM1-202ENST00000378676 XDHP47989 1333 aa22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 STX10O60499 249 aa22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 H2AFXP16104 143 aaPredicted RBP22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 SLC4A8Q2Y0W8 1093 aa22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 SLC10A5Q5PT55 438 aa22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 NGLY1Q96IV0 654 aa22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 CRNKL1Q9BZJ0 848 aaKnown RBP22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 SPATA31A6Q5VVP1 1343 aa22.2■■□□□ 1.14
SHROOM1-202ENST00000378676 URI1O94763 535 aaPredicted RBP22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 BMP15O95972 392 aa22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 SPATA1Q5VX52 437 aa22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 DESI2Q9BSY9 194 aa22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 SRP68Q9UHB9 627 aaKnown RBP22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 ZHX1Q9UKY1 873 aaPredicted RBP22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 SCG2P13521 617 aa22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 PIK3AP1Q6ZUJ8 805 aa22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 C8orf37Q96NL8 207 aa22.19■■□□□ 1.14
SHROOM1-202ENST00000378676 NAV1Q8NEY1 1877 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 MYH1P12882 1939 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 PPP1R3GB7ZBB8 358 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 HIBADHP31937 336 aaKnown RBP22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 RPS8P62241 208 aaKnown RBP22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 MTF1Q14872 753 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 E2F4Q16254 413 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 CDKAL1Q5VV42 579 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 TXNRD3Q86VQ6 643 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 WDR24Q96S15 920 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 PDS5AQ29RF7 1337 aaKnown RBP22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 IL17AQ16552 155 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 RCSD1Q6JBY9 416 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 PTF1AQ7RTS3 328 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 SLC51AQ86UW1 340 aa22.18■■□□□ 1.14
SHROOM1-202ENST00000378676 COBLO75128 1261 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 KIF20AO95235 890 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 CCDC34Q96HJ3 373 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 GSDMAQ96QA5 445 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 BLZF1Q9H2G9 400 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 FAM53CQ9NYF3 392 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 CDK5RAP2Q96SN8 1893 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 CNTNAP4Q9C0A0 1308 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 NLRP5P59047 1200 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 PFKFB3Q16875 520 aaPredicted RBP22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 ARHGAP29Q52LW3 1261 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 CARD6Q9BX69 1037 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 ATP8A2Q9NTI2 1148 aa22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 ARPP21Q9UBL0 812 aaPredicted RBP22.17■■□□□ 1.14
SHROOM1-202ENST00000378676 BTAF1O14981 1849 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 IGSF3O75054 1194 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 TADA3O75528 432 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 PBX1P40424 430 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 ADD3Q9UEY8 706 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 CTNND2Q9UQB3 1225 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 TSPY2A6NKD2 308 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 USP17L8P0C7I0 530 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 MCM7P33993 719 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 CT47A1Q5JQC4 288 aaPredicted RBP22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 MTRQ99707 1265 aa22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 MRPL44Q9H9J2 332 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-202ENST00000378676 FAM205AQ6ZU69 1335 aa22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 SOWAHDA6NJG2 315 aa22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 AKR1B15C9JRZ8 316 aaPredicted RBP22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 CLCN6P51797 869 aa22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 GNG11P61952 73 aa22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 SBK1Q52WX2 424 aa22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 PDXDC2PQ6P474 469 aa22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 FNBP4Q8N3X1 1017 aaPredicted RBP22.15■■□□□ 1.14
SHROOM1-202ENST00000378676 VPS72Q15906 364 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms