RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 TFF2Q03403 129 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 FPGSQ05932 587 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 TFCP2Q12800 502 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 C1orf53Q5VUE5 145 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
DDX39B-201ENST00000376177 CRACR2BQ8N4Y2 399 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-201ENST00000376177 LENG1Q96BZ8 264 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-201ENST00000376177 GAS2L1Q99501 681 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-201ENST00000376177 EPHX3Q9H6B9 360 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 TACC3Q9Y6A5 838 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 IVNS1ABPQ9Y6Y0 642 aa13.4□□□□□ -0.26
DDX39B-201ENST00000376177 PGK1P00558 417 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 VCAM1P19320 739 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 FAAP100Q0VG06 881 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 DPP9Q86TI2 863 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 SPATA5Q8NB90 893 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 C12orf42Q96LP6 360 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 MOV10L1Q9BXT6 1211 aaKnown RBP13.39□□□□□ -0.27
DDX39B-201ENST00000376177 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 PHF24Q9UPV7 400 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 LDHCP07864 332 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 IGFBP4P22692 258 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 PDE4AP27815 886 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 KCNQ1P51787 676 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 GSTO1P78417 241 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 FEZ1Q99689 392 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 LRFN3Q9BTN0 628 aa13.39□□□□□ -0.27
DDX39B-201ENST00000376177 SYNGAP1Q96PV0 1343 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 A0A1W2PQ45 241 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-201ENST00000376177 A0A1W2PQY0 241 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 BMP1P13497 986 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 TAL1P17542 331 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-201ENST00000376177 MCAMP43121 646 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
DDX39B-201ENST00000376177 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-201ENST00000376177 TMEM39AQ9NV64 488 aa13.38□□□□□ -0.27
DDX39B-201ENST00000376177 LRRC37A2A6NM11 1700 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 WDFY4Q6ZS81 3184 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 PTPRCP08575 1304 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 MAP4K4O95819 1239 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-201ENST00000376177 ACRP10323 421 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 DYNLL1P63167 89 aaKnown RBP13.37□□□□□ -0.27
DDX39B-201ENST00000376177 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-201ENST00000376177 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 LBX2Q6XYB7 198 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX39B-201ENST00000376177 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 XPNPEP3Q9NQH7 507 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
DDX39B-201ENST00000376177 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-201ENST00000376177 ERCC3P19447 782 aa13.36□□□□□ -0.27
DDX39B-201ENST00000376177 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
DDX39B-201ENST00000376177 RAB3GAP1Q15042 981 aa13.36□□□□□ -0.27
DDX39B-201ENST00000376177 CENPQQ7L2Z9 268 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-201ENST00000376177 FOXP4Q8IVH2 680 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-201ENST00000376177 TRIM34Q9BYJ4 488 aa13.36□□□□□ -0.27
DDX39B-201ENST00000376177 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
DDX39B-201ENST00000376177 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 RASIP1Q5U651 963 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 MICALL1Q8N3F8 863 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 MAML3Q96JK9 1138 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
DDX39B-201ENST00000376177 YBX2Q9Y2T7 364 aaKnown RBP13.35□□□□□ -0.27
DDX39B-201ENST00000376177 TIMP1P01033 207 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 EVX2Q03828 476 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 NAA16Q6N069 864 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-201ENST00000376177 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 SPATC1LQ9H0A9 340 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 GINM1Q9NU53 330 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 CXXC1Q9P0U4 656 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-201ENST00000376177 MCM3APO60318 1980 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 FAM86C2PA6NEL3 165 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 CSF2RAP15509 400 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
DDX39B-201ENST00000376177 C1QTNF1Q9BXJ1 281 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 C11orf16Q9NQ32 467 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
DDX39B-201ENST00000376177 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 MYADML2A6NDP7 307 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 MYOGP15173 224 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 PPP4CP60510 307 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 AAMPQ13685 434 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
DDX39B-201ENST00000376177 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms